| Literature DB >> 23284355 |
Miguel A Harvey1, Sebastian A Suarez, Andres Ibañez, Fabio Doctorovich, Ricardo Baggio.
Abstract
The mol-ecular structure of the title compound, [Zn(CH(3)COO)(2)(C(12)H(12)N(2))], consists of isolated mol-ecules bis-ected by a twofold rotation axis which goes through the Zn(II) cation and halves the organic base through the central C-C bond. The Zn(II) ion is coordinated by two N atoms from one mol-ecule of the aromatic base and four O atoms from two bidentate, symmetry-related acetate anions, which coordinate asym-metrically [Zn-O distances of 2.058 (2) and 2.362 (3) Å], while the two Zn-N bond distances are equal as imposed by symmetry [2.079 (2) Å]. The crystal structure is supported by a number of weak C-H⋯O inter-actions and C-H⋯π contacts, with no π-π inter-actions present, mainly hindered by the substituent methyl groups and the relative mol-ecular orientation. The result is a three-dimensional structure in which each mol-ecule is linked to eight different neighbors.Entities:
Year: 2012 PMID: 23284355 PMCID: PMC3515128 DOI: 10.1107/S1600536812042699
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C2H3O2)2(C12H12N2)] | |
| Orthorhombic, | Mo |
| Hall symbol: F 2 -2d | Cell parameters from 1985 reflections |
| θ = 3.6–28.9° | |
| µ = 1.49 mm−1 | |
| Prism, white | |
| 0.3 × 0.3 × 0.2 mm |
| Oxford Diffraction Gemini CCD S Ultra diffractometer | 1481 reflections with |
| Graphite monochromator | |
| ω scans, thick slices | θmax = 29.0°, θmin = 3.6° |
| Absorption correction: multi-scan ( | |
| 3945 measured reflections | |
| 1563 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1563 reflections | Δρmax = 0.28 e Å−3 |
| 107 parameters | Δρmin = −0.26 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 374 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.010 (16) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0 | 0 | 0.08552 (5) | 0.04845 (13) | |
| O1 | −0.10026 (14) | 0.03972 (8) | −0.0279 (3) | 0.0745 (6) | |
| N1 | 0.02563 (14) | 0.04418 (7) | 0.2846 (2) | 0.0456 (4) | |
| O2 | −0.12535 (18) | −0.03328 (9) | −0.0599 (3) | 0.0843 (7) | |
| C4 | 0.01794 (12) | 0.05180 (7) | 0.5779 (5) | 0.0421 (5) | |
| H4 | 0.0071 | 0.038 | 0.6803 | 0.051* | |
| C7 | −0.14861 (19) | 0.00731 (10) | −0.0837 (4) | 0.0548 (7) | |
| C5 | 0.01168 (12) | 0.02544 (8) | 0.4354 (3) | 0.0361 (4) | |
| C8 | −0.2331 (2) | 0.01806 (14) | −0.1800 (9) | 0.0900 (14) | |
| H8B | −0.2777 | 0.0328 | −0.1093 | 0.135* | |
| H8C | −0.2584 | −0.0104 | −0.2238 | 0.135* | |
| H8A | −0.2178 | 0.0388 | −0.2694 | 0.135* | |
| C3 | 0.04052 (15) | 0.09917 (8) | 0.5683 (4) | 0.0502 (5) | |
| C1 | 0.0483 (2) | 0.08971 (10) | 0.2769 (4) | 0.0604 (7) | |
| H1 | 0.0586 | 0.103 | 0.1735 | 0.073* | |
| C2 | 0.05697 (19) | 0.11722 (9) | 0.4128 (4) | 0.0607 (7) | |
| H2 | 0.0741 | 0.1484 | 0.401 | 0.073* | |
| C6 | 0.0449 (2) | 0.12828 (10) | 0.7225 (4) | 0.0719 (9) | |
| H6A | 0.0721 | 0.1103 | 0.8101 | 0.108* | |
| H6C | −0.0164 | 0.1376 | 0.7538 | 0.108* | |
| H6B | 0.0818 | 0.1556 | 0.7024 | 0.108* |
| Zn1 | 0.04289 (17) | 0.0737 (3) | 0.02871 (17) | 0.01368 (17) | 0 | 0 |
| O1 | 0.0622 (11) | 0.0907 (14) | 0.0706 (15) | −0.0028 (10) | −0.0158 (11) | −0.0093 (12) |
| N1 | 0.0478 (10) | 0.0549 (11) | 0.0342 (11) | 0.0047 (8) | 0.0032 (8) | 0.0080 (8) |
| O2 | 0.0909 (16) | 0.0871 (15) | 0.0749 (17) | 0.0313 (12) | −0.0146 (13) | −0.0022 (13) |
| C4 | 0.0424 (11) | 0.0480 (10) | 0.0361 (11) | 0.0034 (8) | −0.0042 (16) | 0.0013 (12) |
| C7 | 0.0399 (12) | 0.0850 (19) | 0.0393 (14) | 0.0085 (11) | 0.0013 (10) | −0.0056 (13) |
| C5 | 0.0329 (9) | 0.0459 (12) | 0.0296 (11) | 0.0036 (7) | −0.0017 (8) | 0.0031 (9) |
| C8 | 0.061 (2) | 0.109 (3) | 0.100 (4) | 0.0012 (17) | −0.037 (3) | 0.017 (3) |
| C3 | 0.0452 (10) | 0.0462 (11) | 0.0593 (16) | 0.0006 (9) | −0.0095 (12) | −0.0025 (12) |
| C1 | 0.0654 (15) | 0.0602 (15) | 0.0557 (18) | −0.0014 (12) | 0.0060 (12) | 0.0240 (13) |
| C2 | 0.0621 (16) | 0.0440 (12) | 0.076 (2) | −0.0032 (11) | −0.0005 (14) | 0.0087 (14) |
| C6 | 0.080 (2) | 0.0559 (15) | 0.079 (2) | −0.0007 (14) | −0.0190 (17) | −0.0158 (16) |
| Zn1—O1i | 2.058 (2) | C4—H4 | 0.93 |
| Zn1—O1 | 2.058 (2) | C7—C8 | 1.482 (5) |
| Zn1—N1 | 2.079 (2) | C5—C5i | 1.493 (4) |
| Zn1—N1i | 2.079 (2) | C8—H8B | 0.96 |
| Zn1—O2 | 2.362 (3) | C8—H8C | 0.96 |
| Zn1—O2i | 2.362 (3) | C8—H8A | 0.96 |
| Zn1—C7 | 2.558 (3) | C3—C2 | 1.380 (4) |
| Zn1—C7i | 2.558 (3) | C3—C6 | 1.500 (4) |
| O1—C7 | 1.246 (3) | C1—C2 | 1.357 (4) |
| N1—C1 | 1.343 (3) | C1—H1 | 0.93 |
| N1—C5 | 1.347 (3) | C2—H2 | 0.93 |
| O2—C7 | 1.223 (3) | C6—H6A | 0.96 |
| C4—C5 | 1.380 (4) | C6—H6C | 0.96 |
| C4—C3 | 1.394 (3) | C6—H6B | 0.96 |
| O1i—Zn1—O1 | 127.09 (15) | C5—C4—C3 | 119.9 (3) |
| O1i—Zn1—N1 | 123.63 (9) | C5—C4—H4 | 120 |
| O1—Zn1—N1 | 97.82 (8) | C3—C4—H4 | 120 |
| O1i—Zn1—N1i | 97.82 (8) | O2—C7—O1 | 119.6 (3) |
| O1—Zn1—N1i | 123.63 (9) | O2—C7—C8 | 120.4 (3) |
| N1—Zn1—N1i | 78.52 (11) | O1—C7—C8 | 120.0 (3) |
| O1i—Zn1—O2 | 95.63 (10) | O2—C7—Zn1 | 66.85 (17) |
| O1—Zn1—O2 | 57.21 (9) | O1—C7—Zn1 | 52.72 (15) |
| N1—Zn1—O2 | 140.08 (8) | C8—C7—Zn1 | 172.7 (2) |
| N1i—Zn1—O2 | 90.22 (9) | N1—C5—C4 | 122.0 (2) |
| O1i—Zn1—O2i | 57.21 (9) | N1—C5—C5i | 114.92 (13) |
| O1—Zn1—O2i | 95.63 (10) | C4—C5—C5i | 123.13 (15) |
| N1—Zn1—O2i | 90.22 (9) | C7—C8—H8B | 109.5 |
| N1i—Zn1—O2i | 140.08 (8) | C7—C8—H8C | 109.5 |
| O2—Zn1—O2i | 120.30 (15) | H8B—C8—H8C | 109.5 |
| O1i—Zn1—C7 | 113.57 (9) | C7—C8—H8A | 109.5 |
| O1—Zn1—C7 | 28.79 (8) | H8B—C8—H8A | 109.5 |
| N1—Zn1—C7 | 120.97 (8) | H8C—C8—H8A | 109.5 |
| N1i—Zn1—C7 | 108.27 (9) | C2—C3—C4 | 117.0 (3) |
| O2—Zn1—C7 | 28.42 (8) | C2—C3—C6 | 122.9 (2) |
| O2i—Zn1—C7 | 110.31 (10) | C4—C3—C6 | 120.1 (3) |
| O1i—Zn1—C7i | 28.79 (8) | N1—C1—C2 | 123.1 (2) |
| O1—Zn1—C7i | 113.57 (9) | N1—C1—H1 | 118.5 |
| N1—Zn1—C7i | 108.27 (9) | C2—C1—H1 | 118.5 |
| N1i—Zn1—C7i | 120.97 (8) | C1—C2—C3 | 120.4 (2) |
| O2—Zn1—C7i | 110.31 (10) | C1—C2—H2 | 119.8 |
| O2i—Zn1—C7i | 28.42 (8) | C3—C2—H2 | 119.8 |
| C7—Zn1—C7i | 115.34 (13) | C3—C6—H6A | 109.5 |
| C7—O1—Zn1 | 98.50 (18) | C3—C6—H6C | 109.5 |
| C1—N1—C5 | 117.6 (2) | H6A—C6—H6C | 109.5 |
| C1—N1—Zn1 | 126.56 (18) | C3—C6—H6B | 109.5 |
| C5—N1—Zn1 | 115.64 (15) | H6A—C6—H6B | 109.5 |
| C7—O2—Zn1 | 84.73 (19) | H6C—C6—H6B | 109.5 |
| H··· | ||||
| C2—H2···O1ii | 0.93 | 2.53 | 3.354 (4) | 147 |
| C6—H6 | 0.96 | 2.56 | 3.438 (4) | 153 |
| C4—H4··· | 0.93 | 2.99 | 3.874 (4) | 160 |
| C4—H4··· | 0.93 | 2.96 | 3.766 (4) | 145 |
| C8—H8 | 0.96 | 2.96 | 3.804 (4) | 147 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the Zn1,O1,C7,O2 and N1,C1–C5 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C2—H2⋯O1i | 0.93 | 2.53 | 3.354 (4) | 147 |
| C6—H6 | 0.96 | 2.56 | 3.438 (4) | 153 |
| C4—H4⋯ | 0.93 | 2.99 | 3.874 (4) | 160 |
| C4—H4⋯ | 0.93 | 2.96 | 3.766 (4) | 145 |
| C8—H8 | 0.96 | 2.96 | 3.804 (4) | 147 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .