Literature DB >> 23284337

trans-Dichloridobis(4-nitro-aniline-κN(1))palladium(II).

Tian-Jun Feng1.   

Abstract

In the title compound, [PdCl(2)(C(6)H(6)N(2)O(2))(2)], the Pd(II) atom is coordinated in a distorted square-planar geometry by two N atoms from two 4-nitro-aniline ligands and two Cl atoms in a trans arrangement. Inter-molecular N-H⋯Cl hydrogen bonds involving the amino groups and chloride anions lead to a chain along [100]. These chains are further self-assembled into a three-dimensional network through N-H⋯O and N-H⋯Cl hydrogen bonds.

Entities:  

Year:  2012        PMID: 23284337      PMCID: PMC3515110          DOI: 10.1107/S1600536812042134

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the application of palladium compounds in catalysis, see: Hartley (1973 ▶); Padmanabhan et al. (1985 ▶). For related structures, see: Chen et al. (2002 ▶); Newkome et al. (1982 ▶).

Experimental

Crystal data

[PdCl2(C6H6N2O2)2] M = 453.56 Monoclinic, a = 5.6014 (8) Å b = 26.246 (4) Å c = 11.0763 (16) Å β = 99.828 (2)° V = 1604.5 (4) Å3 Z = 4 Mo Kα radiation μ = 1.51 mm−1 T = 296 K 0.33 × 0.30 × 0.26 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.626, T max = 0.688 4453 measured reflections 2135 independent reflections 2075 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.077 S = 1.06 2135 reflections 208 parameters 2 restraints H-atom parameters constrained Δρmax = 0.50 e Å−3 Δρmin = −0.37 e Å−3 Absolute structure: Flack (1983 ▶), 696 Friedel pairs Flack parameter: 0.46 (4) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812042134/hy2592sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812042134/hy2592Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[PdCl2(C6H6N2O2)2]F(000) = 896
Mr = 453.56Dx = 1.878 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 5300 reflections
a = 5.6014 (8) Åθ = 1.3–28.0°
b = 26.246 (4) ŵ = 1.51 mm1
c = 11.0763 (16) ÅT = 296 K
β = 99.828 (2)°Block, yellow
V = 1604.5 (4) Å30.33 × 0.30 × 0.26 mm
Z = 4
Bruker APEXII CCD diffractometer2135 independent reflections
Radiation source: fine-focus sealed tube2075 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.018
φ and ω scansθmax = 25.2°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −6→6
Tmin = 0.626, Tmax = 0.688k = −28→31
4453 measured reflectionsl = −13→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.021H-atom parameters constrained
wR(F2) = 0.077w = 1/[σ2(Fo2) + (0.059P)2 + 0.1195P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.002
2135 reflectionsΔρmax = 0.50 e Å3
208 parametersΔρmin = −0.37 e Å3
2 restraintsAbsolute structure: Flack (1983), 696 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.46 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7813 (8)0.46008 (19)0.2257 (5)0.0324 (10)
C20.6105 (10)0.4507 (2)0.2984 (6)0.0405 (13)
H20.48960.47450.30370.049*
C30.6200 (9)0.4053 (2)0.3641 (5)0.0406 (12)
H30.50980.39850.41610.049*
C40.7981 (9)0.37081 (19)0.3496 (5)0.0358 (11)
C50.9644 (10)0.3795 (2)0.2764 (5)0.0403 (12)
H51.07980.35470.26920.048*
C60.9651 (10)0.4245 (2)0.2123 (5)0.0380 (12)
H61.08010.43110.16290.046*
C71.1775 (9)0.66743 (19)0.2754 (5)0.0313 (10)
C80.9834 (10)0.6949 (2)0.3044 (5)0.0371 (11)
H80.89610.68280.36280.045*
C90.9216 (10)0.7412 (2)0.2439 (5)0.0380 (12)
H90.79170.76050.26060.046*
C101.0586 (8)0.75750 (18)0.1588 (4)0.0307 (10)
C111.2582 (9)0.73067 (19)0.1320 (5)0.0358 (11)
H111.35030.74320.07620.043*
C121.3145 (9)0.6845 (2)0.1918 (5)0.0366 (11)
H121.44450.66530.17530.044*
Cl11.2293 (4)0.55635 (8)0.0903 (2)0.0436 (6)
Cl20.7793 (4)0.56838 (7)0.4000 (2)0.0408 (5)
N10.7776 (8)0.50756 (15)0.1568 (4)0.0356 (9)
H1A0.62530.51980.14270.043*
H1B0.82080.50100.08370.043*
N21.2299 (8)0.61827 (16)0.3332 (4)0.0365 (9)
H2A1.21090.62020.41220.044*
H2B1.38510.60990.33160.044*
N30.8016 (11)0.3224 (2)0.4165 (6)0.0463 (15)
N40.9877 (9)0.80407 (15)0.0883 (5)0.0404 (10)
O10.6631 (11)0.3158 (2)0.4860 (6)0.0769 (16)
O20.9473 (9)0.28974 (16)0.3938 (5)0.0609 (12)
O30.7966 (11)0.8248 (2)0.1012 (5)0.0674 (18)
O41.1159 (9)0.82003 (16)0.0195 (5)0.0601 (12)
Pd11.00552 (7)0.562350 (12)0.24606 (5)0.02914 (13)
U11U22U33U12U13U23
C10.027 (2)0.035 (3)0.035 (3)−0.0012 (19)0.005 (2)0.000 (2)
C20.029 (3)0.037 (3)0.056 (4)0.001 (2)0.010 (3)−0.008 (3)
C30.034 (3)0.045 (3)0.047 (3)−0.006 (2)0.020 (2)−0.003 (3)
C40.038 (3)0.032 (3)0.036 (3)−0.006 (2)0.004 (2)−0.002 (2)
C50.039 (3)0.041 (3)0.042 (3)0.006 (2)0.010 (2)−0.003 (2)
C60.038 (3)0.044 (3)0.033 (3)−0.003 (2)0.011 (2)0.002 (2)
C70.029 (2)0.029 (2)0.036 (2)−0.0016 (19)0.005 (2)−0.005 (2)
C80.040 (3)0.039 (3)0.036 (3)−0.005 (2)0.016 (2)0.004 (2)
C90.035 (2)0.033 (3)0.046 (3)0.0080 (19)0.007 (3)−0.005 (2)
C100.028 (2)0.031 (2)0.033 (3)−0.0011 (18)0.006 (2)0.000 (2)
C110.033 (2)0.038 (3)0.039 (3)0.000 (2)0.013 (2)−0.001 (2)
C120.029 (2)0.040 (3)0.041 (3)0.004 (2)0.007 (2)−0.002 (2)
Cl10.0384 (10)0.0581 (11)0.0374 (11)0.0009 (7)0.0154 (8)0.0016 (7)
Cl20.0420 (10)0.0447 (9)0.0380 (11)0.0022 (6)0.0133 (8)−0.0019 (7)
N10.033 (2)0.035 (2)0.038 (2)−0.0002 (17)0.0059 (18)−0.0011 (18)
N20.036 (2)0.036 (2)0.036 (2)0.0006 (17)0.0009 (18)0.0037 (18)
N30.059 (3)0.043 (3)0.037 (3)−0.003 (3)0.008 (3)0.004 (2)
N40.045 (2)0.031 (2)0.045 (3)0.0020 (19)0.007 (2)0.001 (2)
O10.084 (4)0.069 (3)0.087 (4)−0.002 (3)0.040 (3)0.028 (3)
O20.076 (3)0.044 (2)0.056 (3)0.008 (2)−0.005 (2)0.006 (2)
O30.086 (4)0.068 (4)0.057 (3)0.042 (3)0.036 (3)0.024 (3)
O40.064 (3)0.053 (3)0.071 (3)0.004 (2)0.031 (2)0.023 (2)
Pd10.02850 (17)0.02877 (19)0.03039 (19)0.00214 (16)0.00572 (12)0.00207 (17)
C1—C21.374 (8)C9—H90.9300
C1—C61.416 (8)C10—C111.395 (7)
C1—N11.459 (7)C10—N41.468 (6)
C2—C31.394 (9)C11—C121.390 (7)
C2—H20.9300C11—H110.9300
C3—C41.376 (8)C12—H120.9300
C3—H30.9300Cl1—Pd12.305 (2)
C4—C51.354 (8)Cl2—Pd12.297 (2)
C4—N31.470 (8)N1—Pd12.060 (4)
C5—C61.379 (8)N1—H1A0.9000
C5—H50.9300N1—H1B0.9000
C6—H60.9300N2—Pd12.062 (4)
C7—C121.375 (8)N2—H2A0.9000
C7—C81.387 (7)N2—H2B0.9000
C7—N21.448 (7)N3—O11.196 (9)
C8—C91.403 (8)N3—O21.238 (8)
C8—H80.9300N4—O41.207 (7)
C9—C101.381 (8)N4—O31.231 (7)
C2—C1—C6122.3 (5)C12—C11—C10117.6 (5)
C2—C1—N1120.6 (5)C12—C11—H11121.2
C6—C1—N1117.0 (5)C10—C11—H11121.2
C1—C2—C3119.4 (5)C7—C12—C11119.9 (5)
C1—C2—H2120.3C7—C12—H12120.1
C3—C2—H2120.3C11—C12—H12120.1
C4—C3—C2117.7 (5)C1—N1—Pd1113.1 (3)
C4—C3—H3121.1C1—N1—H1A109.0
C2—C3—H3121.1Pd1—N1—H1A109.0
C5—C4—C3123.1 (5)C1—N1—H1B109.0
C5—C4—N3119.7 (5)Pd1—N1—H1B109.0
C3—C4—N3117.2 (5)H1A—N1—H1B107.8
C4—C5—C6120.9 (5)C7—N2—Pd1111.5 (3)
C4—C5—H5119.5C7—N2—H2A109.3
C6—C5—H5119.5Pd1—N2—H2A109.3
C5—C6—C1116.5 (5)C7—N2—H2B109.3
C5—C6—H6121.8Pd1—N2—H2B109.3
C1—C6—H6121.8H2A—N2—H2B108.0
C12—C7—C8122.4 (5)O1—N3—O2123.6 (6)
C12—C7—N2119.7 (5)O1—N3—C4119.7 (6)
C8—C7—N2117.9 (5)O2—N3—C4116.6 (6)
C7—C8—C9118.6 (5)O4—N4—O3122.9 (5)
C7—C8—H8120.7O4—N4—C10119.2 (5)
C9—C8—H8120.7O3—N4—C10117.9 (5)
C10—C9—C8118.3 (5)N1—Pd1—N2178.86 (17)
C10—C9—H9120.8N1—Pd1—Cl291.68 (14)
C8—C9—H9120.8N2—Pd1—Cl288.43 (15)
C9—C10—C11123.2 (5)N1—Pd1—Cl187.97 (15)
C9—C10—N4119.3 (4)N2—Pd1—Cl191.91 (15)
C11—C10—N4117.5 (4)Cl2—Pd1—Cl1179.48 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl1i0.902.403.293 (5)175
N1—H1B···Cl2ii0.902.713.474 (5)143
N2—H2A···O3iii0.902.523.287 (7)143
N2—H2B···Cl2iv0.902.463.310 (5)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯Cl1i 0.902.403.293 (5)175
N1—H1B⋯Cl2ii 0.902.713.474 (5)143
N2—H2A⋯O3iii 0.902.523.287 (7)143
N2—H2B⋯Cl2iv 0.902.463.310 (5)157

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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