Literature DB >> 23273612

Chemical proteomics: ligation and cleavage of protein modifications.

Georg C Rudolf1, Wolfgang Heydenreuter, Stephan A Sieber.   

Abstract

Bioorthogonal ligation and cleavage methods are of major importance in the field of chemical biology. Recently, there has been significant progress in the improvement of classic ligation procedures as well as in the establishment of new ligation methodologies. Furthermore, the design of cleavable linkers for protein enrichment has lately received much attention. These techniques equip researchers with a wealth of tools suitable for proteomic applications. In order to ease navigation through these diverse systems, we here provide a comprehensive overview of methods that are useful for chemical proteomics.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23273612     DOI: 10.1016/j.cbpa.2012.11.007

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  13 in total

1.  Building and Breaking Bonds via a Compact S-Propargyl-Cysteine to Chemically Control Enzymes and Modify Proteins.

Authors:  Jun Liu; Rujin Cheng; Haifan Wu; Shanshan Li; Peng G Wang; William F DeGrado; Sharon Rozovsky; Lei Wang
Journal:  Angew Chem Int Ed Engl       Date:  2018-09-05       Impact factor: 15.336

2.  Simple and Efficient Room-Temperature Release of Biotinylated Nucleic Acids from Streptavidin and Its Application to Selective Molecular Detection.

Authors:  Samuel Bearden; Fanny Wang; Adam R Hall
Journal:  Anal Chem       Date:  2019-06-12       Impact factor: 6.986

3.  Reactivity-based screening for natural product discovery.

Authors:  Lonnie A Harris; Douglas A Mitchell
Journal:  Methods Enzymol       Date:  2021-12-21       Impact factor: 1.682

4.  Cyclic acetals as cleavable linkers for affinity capture.

Authors:  Siyeon Lee; Wei Wang; Younjoo Lee; Nicole S Sampson
Journal:  Org Biomol Chem       Date:  2015-08-21       Impact factor: 3.876

5.  Control of RNA with quinone methide reversible acylating reagents.

Authors:  Hyun Shin Park; Biswarup Jash; Lu Xiao; Yong Woong Jun; Eric T Kool
Journal:  Org Biomol Chem       Date:  2021-10-06       Impact factor: 3.890

Review 6.  Studying epigenetic complexes and their inhibitors with the proteomics toolbox.

Authors:  David Weigt; Carsten Hopf; Guillaume Médard
Journal:  Clin Epigenetics       Date:  2016-07-18       Impact factor: 6.551

7.  Mapping sites of aspirin-induced acetylations in live cells by quantitative acid-cleavable activity-based protein profiling (QA-ABPP).

Authors:  Jigang Wang; Chong-Jing Zhang; Jianbin Zhang; Yingke He; Yew Mun Lee; Songbi Chen; Teck Kwang Lim; Shukie Ng; Han-Ming Shen; Qingsong Lin
Journal:  Sci Rep       Date:  2015-01-20       Impact factor: 4.379

Review 8.  Advanced Activity-Based Protein Profiling Application Strategies for Drug Development.

Authors:  Shan Wang; Yu Tian; Min Wang; Min Wang; Gui-Bo Sun; Xiao-Bo Sun
Journal:  Front Pharmacol       Date:  2018-04-09       Impact factor: 5.810

9.  Fishing for newly synthesized proteins with phosphonate-handles.

Authors:  Fleur Kleinpenning; Barbara Steigenberger; Wei Wu; Albert J R Heck
Journal:  Nat Commun       Date:  2020-06-26       Impact factor: 14.919

10.  Protein Extraction Methods Shape Much of the Extracted Proteomes.

Authors:  Liangjie Niu; Huayi Yuan; Fangping Gong; Xiaolin Wu; Wei Wang
Journal:  Front Plant Sci       Date:  2018-06-12       Impact factor: 5.753

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