Literature DB >> 23271067

Mobilome and genetic modification of bifidobacteria.

S Guglielmetti1, B Mayo, P Álvarez-Martín.   

Abstract

Until recently, proper development of molecular studies in Bifidobacterium species has been hampered by growth difficulties, because of their exigent nutritive requirements, oxygen sensitivity and lack of efficient genetic tools. These studies, however, are critical to uncover the cross-talk between bifidobacteria and their hosts' cells and to prove unequivocally the supposed beneficial effects provided through the endogenous bifidobacterial populations or after ingestion as probiotics. The genome sequencing projects of different bifidobacterial strains have provided a wealth of genetic data that will be of much help in deciphering the molecular basis of the physiological properties of bifidobacteria. To this end, the purposeful development of stable cloning and expression vectors based on robust replicons - either from temperate phages or resident plasmids - is still needed. This review addresses the current knowledge on the mobile genetic elements of bifidobacteria (prophages, plasmids and transposons) and summarises the different types of vectors already available, together with the transformation procedures for introducing DNA into the cells. It also covers recent molecular studies performed with such vectors and incipient results on the genetic modification of these organisms, establishing the basis that would allow the use of bifidobacteria for future biotechnological applications.

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Year:  2013        PMID: 23271067     DOI: 10.3920/BM2012.0031

Source DB:  PubMed          Journal:  Benef Microbes        ISSN: 1876-2883            Impact factor:   4.205


  8 in total

1.  Murein lytic enzyme TgaA of Bifidobacterium bifidum MIMBb75 modulates dendritic cell maturation through its cysteine- and histidine-dependent amidohydrolase/peptidase (CHAP) amidase domain.

Authors:  Simone Guglielmetti; Ivan Zanoni; Silvia Balzaretti; Matteo Miriani; Valentina Taverniti; Ivano De Noni; Ilaria Presti; Milda Stuknyte; Alessio Scarafoni; Stefania Arioli; Stefania Iametti; Francesco Bonomi; Diego Mora; Matti Karp; Francesca Granucci
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

2.  Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome.

Authors:  Tue Sparholt Jørgensen; Zhuofei Xu; Martin Asser Hansen; Søren Johannes Sørensen; Lars Hestbjerg Hansen
Journal:  PLoS One       Date:  2014-02-04       Impact factor: 3.240

3.  Complete Genome Sequence of Bifidobacterium longum 105-A, a Strain with High Transformation Efficiency.

Authors:  Yu Kanesaki; Hisayoshi Masutani; Mikiyasu Sakanaka; Yuh Shiwa; Takatomo Fujisawa; Yasukazu Nakamura; Atsushi Yokota; Satoru Fukiya; Tohru Suzuki; Hirofumi Yoshikawa
Journal:  Genome Announc       Date:  2014-12-18

4.  Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan.

Authors:  Toshitaka Odamaki; Francesca Bottacini; Kumiko Kato; Eri Mitsuyama; Keisuke Yoshida; Ayako Horigome; Jin-Zhong Xiao; Douwe van Sinderen
Journal:  Sci Rep       Date:  2018-01-08       Impact factor: 4.379

5.  Capsular polysaccharide inhibits adhesion of Bifidobacterium longum 105-A to enterocyte-like Caco-2 cells and phagocytosis by macrophages.

Authors:  Amin Tahoun; Hisayoshi Masutani; Hanem El-Sharkawy; Trudi Gillespie; Ryo P Honda; Kazuo Kuwata; Mizuho Inagaki; Tomio Yabe; Izumi Nomura; Tohru Suzuki
Journal:  Gut Pathog       Date:  2017-05-01       Impact factor: 4.181

6.  Mobilome and Resistome Reconstruction from Genomes Belonging to Members of the Bifidobacterium Genus.

Authors:  Walter Mancino; Gabriele Andrea Lugli; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Microorganisms       Date:  2019-12-02

7.  Intestinal transgene delivery with native E. coli chassis allows persistent physiological changes.

Authors:  Baylee J Russell; Steven D Brown; Nicole Siguenza; Irene Mai; Anand R Saran; Amulya Lingaraju; Erica S Maissy; Ana C Dantas Machado; Antonio F M Pinto; Concepcion Sanchez; Leigh-Ana Rossitto; Yukiko Miyamoto; R Alexander Richter; Samuel B Ho; Lars Eckmann; Jeff Hasty; David J Gonzalez; Alan Saghatelian; Rob Knight; Amir Zarrinpar
Journal:  Cell       Date:  2022-08-04       Impact factor: 66.850

8.  Identification of restriction-modification systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT sequencing and associated methylome analysis.

Authors:  Mary O' Connell Motherway; Debbie Watson; Francesca Bottacini; Tyson A Clark; Richard J Roberts; Jonas Korlach; Peggy Garault; Christian Chervaux; Johan E T van Hylckama Vlieg; Tamara Smokvina; Douwe van Sinderen
Journal:  PLoS One       Date:  2014-04-17       Impact factor: 3.240

  8 in total

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