Literature DB >> 23267188

Single-molecule imaging in live bacteria cells.

Ken Ritchie1, Yoriko Lill, Chetan Sood, Hochan Lee, Shunyuan Zhang.   

Abstract

Bacteria, such as Escherichia coli and Caulobacter crescentus, are the most studied and perhaps best-understood organisms in biology. The advances in understanding of living systems gained from these organisms are immense. Application of single-molecule techniques in bacteria have presented unique difficulties owing to their small size and highly curved form. The aim of this review is to show advances made in single-molecule imaging in bacteria over the past 10 years, and to look to the future where the combination of implementing such high-precision techniques in well-characterized and controllable model systems such as E. coli could lead to a greater understanding of fundamental biological questions inaccessible through classic ensemble methods.

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Year:  2012        PMID: 23267188      PMCID: PMC3538437          DOI: 10.1098/rstb.2012.0355

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  38 in total

1.  The motion of a single molecule, the lambda-receptor, in the bacterial outer membrane.

Authors:  Lene Oddershede; Jakob Kisbye Dreyer; Sonia Grego; Stanley Brown; Kirstine Berg-Sørensen
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

2.  Single-particle tracking of oriC-GFP fluorescent spots during chromosome segregation in Escherichia coli.

Authors:  Steven Elmore; Michiel Müller; Norbert Vischer; Theo Odijk; Conrad L Woldringh
Journal:  J Struct Biol       Date:  2005-09       Impact factor: 2.867

3.  Stoichiometry and turnover in single, functioning membrane protein complexes.

Authors:  Mark C Leake; Jennifer H Chandler; George H Wadhams; Fan Bai; Richard M Berry; Judith P Armitage
Journal:  Nature       Date:  2006-09-13       Impact factor: 49.962

4.  Stochastic protein expression in individual cells at the single molecule level.

Authors:  Long Cai; Nir Friedman; X Sunney Xie
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

5.  Investigating intracellular dynamics of FtsZ cytoskeleton with photoactivation single-molecule tracking.

Authors:  Lili Niu; Ji Yu
Journal:  Biophys J       Date:  2008-04-04       Impact factor: 4.033

6.  Single-molecule study of molecular mobility in the cytoplasm of Escherichia coli.

Authors:  Yoriko Lill; Wallace A Kaserer; Salete M Newton; Markus Lill; Phillip E Klebba; Ken Ritchie
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-08-09

7.  DNA dynamics vary according to macrodomain topography in the E. coli chromosome.

Authors:  Olivier Espeli; Romain Mercier; Frédéric Boccard
Journal:  Mol Microbiol       Date:  2008-04-11       Impact factor: 3.501

8.  Dynamic behavior of the transferrin receptor followed in living epidermoid carcinoma (A431) cells with nanovid microscopy.

Authors:  M De Brabander; R Nuydens; H Geerts; C R Hopkins
Journal:  Cell Motil Cytoskeleton       Date:  1988

9.  Variable stoichiometry of the TatA component of the twin-arginine protein transport system observed by in vivo single-molecule imaging.

Authors:  Mark C Leake; Nicholas P Greene; Rachel M Godun; Thierry Granjon; Grant Buchanan; Shuyun Chen; Richard M Berry; Tracy Palmer; Ben C Berks
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-01       Impact factor: 11.205

10.  The nature of the negative resistance in bimolecular lipid membranes containing excitability-inducing material.

Authors:  G Ehrenstein; H Lecar; R Nossal
Journal:  J Gen Physiol       Date:  1970-01       Impact factor: 4.086

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  11 in total

1.  Spectrofluorimetric quantification of antibiotic drug concentration in bacterial cells for the characterization of translocation across bacterial membranes.

Authors:  Julia Vergalli; Estelle Dumont; Jelena Pajović; Bertrand Cinquin; Laure Maigre; Muriel Masi; Matthieu Réfrégiers; Jean-Marie Pagés
Journal:  Nat Protoc       Date:  2018-05-17       Impact factor: 13.491

2.  The physics of life: one molecule at a time.

Authors:  Mark C Leake
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-12-24       Impact factor: 6.237

Review 3.  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria.

Authors:  Alexander Cambré; Abram Aertsen
Journal:  Microbiol Mol Biol Rev       Date:  2020-10-28       Impact factor: 11.056

4.  Single molecule tracking of bacterial cell surface cytochromes reveals dynamics that impact long-distance electron transport.

Authors:  Grace W Chong; Sahand Pirbadian; Yunke Zhao; Lori A Zacharoff; Fabien Pinaud; Mohamed Y El-Naggar
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-03       Impact factor: 12.779

Review 5.  Imaging live cells at the nanometer-scale with single-molecule microscopy: obstacles and achievements in experiment optimization for microbiology.

Authors:  Beth L Haas; Jyl S Matson; Victor J DiRita; Julie S Biteen
Journal:  Molecules       Date:  2014-08-13       Impact factor: 4.411

Review 6.  Protein-protein interactions and the spatiotemporal dynamics of bacterial outer membrane proteins.

Authors:  Colin Kleanthous; Patrice Rassam; Christoph G Baumann
Journal:  Curr Opin Struct Biol       Date:  2015-11-26       Impact factor: 6.809

Review 7.  Super-Resolution Imaging of Protein Secretion Systems and the Cell Surface of Gram-Negative Bacteria.

Authors:  Sachith D Gunasinghe; Chaille T Webb; Kirstin D Elgass; Iain D Hay; Trevor Lithgow
Journal:  Front Cell Infect Microbiol       Date:  2017-05-29       Impact factor: 5.293

Review 8.  Role of the lipid bilayer in outer membrane protein folding in Gram-negative bacteria.

Authors:  Jim E Horne; David J Brockwell; Sheena E Radford
Journal:  J Biol Chem       Date:  2020-06-04       Impact factor: 5.157

Review 9.  Understanding Conformational Dynamics of Complex Lipid Mixtures Relevant to Biology.

Authors:  Ran Friedman; Syma Khalid; Camilo Aponte-Santamaría; Elena Arutyunova; Marlon Becker; Kevin J Boyd; Mikkel Christensen; João T S Coimbra; Simona Concilio; Csaba Daday; Floris J van Eerden; Pedro A Fernandes; Frauke Gräter; Davit Hakobyan; Andreas Heuer; Konstantina Karathanou; Fabian Keller; M Joanne Lemieux; Siewert J Marrink; Eric R May; Antara Mazumdar; Richard Naftalin; Mónica Pickholz; Stefano Piotto; Peter Pohl; Peter Quinn; Maria J Ramos; Birgit Schiøtt; Durba Sengupta; Lucia Sessa; Stefano Vanni; Talia Zeppelin; Valeria Zoni; Ana-Nicoleta Bondar; Carmen Domene
Journal:  J Membr Biol       Date:  2018-10-22       Impact factor: 1.843

10.  MreB-Dependent Organization of the E. coli Cytoplasmic Membrane Controls Membrane Protein Diffusion.

Authors:  Felix Oswald; Aravindan Varadarajan; Holger Lill; Erwin J G Peterman; Yves J M Bollen
Journal:  Biophys J       Date:  2016-03-08       Impact factor: 4.033

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