Literature DB >> 23265997

Current progress on structural studies of nucleosomes containing histone H3 variants.

Hitoshi Kurumizaka1, Naoki Horikoshi, Hiroaki Tachiwana, Wataru Kagawa.   

Abstract

The nucleosome is the basic repeating unit of chromatin. During the nucleosome assembly process, DNA is wrapped around two H3-H4 dimers, followed by the inclusion of two H2A-H2B dimers. The H3-H4 dimers provide the fundamental architecture of the nucleosome. Many non-allelic variants have been found for H3, but not for H4, suggesting that the functions of chromatin domains may, at least in part, be dictated by the specific H3 variant that is incorporated. A prominent example is the centromeric H3 variant, CENP-A, which specifies the function of centromeres in chromosomes. In this review, we survey the current progress in the studies of nucleosomes containing H3 variants, and discuss their implications for the architecture and dynamics of chromatin domains.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23265997     DOI: 10.1016/j.sbi.2012.10.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  16 in total

1.  Discovering centromere proteins: from cold white hands to the A, B, C of CENPs.

Authors:  William C Earnshaw
Journal:  Nat Rev Mol Cell Biol       Date:  2015-05-20       Impact factor: 94.444

2.  Chemical and biological tools for the preparation of modified histone proteins.

Authors:  Cecil J Howard; Ruixuan R Yu; Miranda L Gardner; John C Shimko; Jennifer J Ottesen
Journal:  Top Curr Chem       Date:  2015

3.  Identification of the amino acid residues responsible for stable nucleosome formation by histone H3.Y.

Authors:  Tomoya Kujirai; Naoki Horikoshi; Yan Xie; Hiroyuki Taguchi; Hitoshi Kurumizaka
Journal:  Nucleus       Date:  2017-01-24       Impact factor: 4.197

4.  The Oligomerization Landscape of Histones.

Authors:  Haiqing Zhao; David Winogradoff; Yamini Dalal; Garegin A Papoian
Journal:  Biophys J       Date:  2019-04-17       Impact factor: 4.033

5.  De novo reconstitution of chromatin using wheat germ cell-free protein synthesis.

Authors:  Yaeta Endo; Nobuaki Takemori; Szilvia K Nagy; Kei-Ichi Okimune; Rohinton Kamakaka; Hitoshi Onouchi; Taichi E Takasuka
Journal:  FEBS Open Bio       Date:  2021-05-16       Impact factor: 2.693

6.  Structural basis of a nucleosome containing histone H2A.B/H2A.Bbd that transiently associates with reorganized chromatin.

Authors:  Yasuhiro Arimura; Hiroshi Kimura; Takashi Oda; Koichi Sato; Akihisa Osakabe; Hiroaki Tachiwana; Yuko Sato; Yasuha Kinugasa; Tsuyoshi Ikura; Masaaki Sugiyama; Mamoru Sato; Hitoshi Kurumizaka
Journal:  Sci Rep       Date:  2013-12-16       Impact factor: 4.379

7.  Crystal structure and stable property of the cancer-associated heterotypic nucleosome containing CENP-A and H3.3.

Authors:  Yasuhiro Arimura; Kazuyoshi Shirayama; Naoki Horikoshi; Risa Fujita; Hiroyuki Taguchi; Wataru Kagawa; Tatsuo Fukagawa; Geneviève Almouzni; Hitoshi Kurumizaka
Journal:  Sci Rep       Date:  2014-11-19       Impact factor: 4.379

Review 8.  Structure of centromere chromatin: from nucleosome to chromosomal architecture.

Authors:  Thomas Schalch; Florian A Steiner
Journal:  Chromosoma       Date:  2016-11-17       Impact factor: 4.316

9.  Comparing the Assembly and Handedness Dynamics of (H3.3-H4)2 Tetrasomes to Canonical Tetrasomes.

Authors:  Rifka Vlijm; Mina Lee; Orkide Ordu; Anastasiya Boltengagen; Alexandra Lusser; Nynke H Dekker; Cees Dekker
Journal:  PLoS One       Date:  2015-10-27       Impact factor: 3.240

10.  Structural and biochemical analyses of monoubiquitinated human histones H2B and H4.

Authors:  Shinichi Machida; Satoshi Sekine; Yuuki Nishiyama; Naoki Horikoshi; Hitoshi Kurumizaka
Journal:  Open Biol       Date:  2016-06       Impact factor: 6.411

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