Literature DB >> 23264505

Geodermatophilus soli sp. nov. and Geodermatophilus terrae sp. nov., two actinobacteria isolated from grass soil.

Long Jin1, Hyung-Gwan Lee1, Hee-Sik Kim1, Chi-Yong Ahn1, Hee-Mock Oh1.   

Abstract

Two strains, PB34(T) and PB261(T), were isolated from grass soil sampled in Daejeon, Republic of Korea. Comparative 16S rRNA gene sequence studies showed the two bacteria to be clearly affiliated with the phylum Actinobacteria and most closely related to the genus Geodermatophilus, showing 16S rRNA gene sequence similarities to the type strains of species of the genus Geodermatophilus of 95.0-96.3 % and sharing 98.5 % similarity between the two strains. The two strains were Gram-stain-positive, aerobic, motile and rod-shaped bacteria. The peptidoglycan contained meso-diaminopimelic acid as the diagnostic diamino acid. The predominant menaquinones were MK-9(H4) and MK-9(H0). The major fatty acids were iso-C15 : 0, iso-C16 : 0, iso-C17 : 0 and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) for strain PB34(T) and iso-C14 : 0, iso-C15 : 0, iso-C16 : 0 and C16 : 0 for strain PB261(T). The G+C contents of the genomic DNA of strains PB34(T) and PB261(T) were 73.2 mol% and 74.1 mol%, respectively. Thus, based on the evidence of a polyphasic study, it is proposed that strains PB34(T) and PB261(T) represent two novel species, for which the names Geodermatophilus soli sp. nov. (type strain PB34(T) = KCTC 19880(T) = JCM 17785(T)) and Geodermatophilus terrae sp. nov. (type strain PB261(T) = KCTC 19881(T) = JCM 17786(T)) are proposed.

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Year:  2012        PMID: 23264505     DOI: 10.1099/ijs.0.048892-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  8 in total

1.  Description of gamma radiation-resistant Geodermatophilus dictyosporus sp. nov. to accommodate the not validly named Geodermatophilus obscurus subsp. dictyosporus (Luedemann, 1968).

Authors:  Maria del Carmen Montero-Calasanz; Karima Hezbri; Markus Göker; Haïtham Sghaier; Manfred Rohde; Cathrin Spröer; Peter Schumann; Hans-Peter Klenk
Journal:  Extremophiles       Date:  2014-11-16       Impact factor: 2.395

2.  Description of Geodermatophilus amargosae sp. nov., to accommodate the not validly named Geodermatophilus obscurus subsp. amargosae (Luedemann, 1968).

Authors:  Maria del Carmen Montero-Calasanz; Markus Göker; Manfred Rohde; Cathrin Spröer; Peter Schumann; Shanmugam Mayilraj; Michael Goodfellow; Hans-Peter Klenk
Journal:  Curr Microbiol       Date:  2013-11-08       Impact factor: 2.188

3.  Metagenomic insights into effects of spent engine oil perturbation on the microbial community composition and function in a tropical agricultural soil.

Authors:  Lateef B Salam; Sunday O Obayori; Francisca O Nwaokorie; Aisha Suleiman; Raheemat Mustapha
Journal:  Environ Sci Pollut Res Int       Date:  2017-01-16       Impact factor: 4.223

4.  Robiginitalea marina sp. nov., isolated from coastal sediment.

Authors:  Xiao-Qi Xuan; Run-Yuan Mao; Wen-Xing Yu; Jing An; Zong-Jun Du; Da-Shuai Mu
Journal:  Arch Microbiol       Date:  2022-09-26       Impact factor: 2.667

5.  Land-use change alters the bacterial community structure, but not forest management.

Authors:  Viviana Rodríguez Rivera; Yendi E Navarro-Noya; Luc Dendooven; Marco Luna Guido
Journal:  Folia Microbiol (Praha)       Date:  2022-10-22       Impact factor: 2.629

6.  Ubiquity, diversity and physiological characteristics of Geodermatophilaceae in Shapotou National Desert Ecological Reserve.

Authors:  Hong-Min Sun; Tao Zhang; Li-Yan Yu; Keya Sen; Yu-Qin Zhang
Journal:  Front Microbiol       Date:  2015-09-30       Impact factor: 5.640

7.  Geodermatophilus poikilotrophi sp. nov.: a multitolerant actinomycete isolated from dolomitic marble.

Authors:  Maria del Carmen Montero-Calasanz; Benjamin Hofner; Markus Göker; Manfred Rohde; Cathrin Spröer; Karima Hezbri; Maher Gtari; Peter Schumann; Hans-Peter Klenk
Journal:  Biomed Res Int       Date:  2014-07-09       Impact factor: 3.411

8.  Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae.

Authors:  Maria Del Carmen Montero-Calasanz; Jan P Meier-Kolthoff; Dao-Feng Zhang; Adnan Yaramis; Manfred Rohde; Tanja Woyke; Nikos C Kyrpides; Peter Schumann; Wen-Jun Li; Markus Göker
Journal:  Front Microbiol       Date:  2017-12-19       Impact factor: 5.640

  8 in total

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