Literature DB >> 23264070

Molecular characterization, expression profiles of the porcine SDC2 and HSPG2 genes and their association with hematologic parameters.

Weimin Wang1, Cong Tao, Ping Zhou, Xiang Zhou, Qingde Zhang, Bang Liu.   

Abstract

Heparan sulfate proteoglycans (HSPGs) located at the cell surface and in the extracellular matrix of most animal tissues are proteoglycan coreceptors that carry heparan sulfate chains, and play a vital role in infections of many diseases. HSPGs are classified as glypican, syndecan, perlecan and agrin according to different core proteins. Syndecan-2 (SDC2) is one of the four coding genes of syndecan, while heparan sulfate proteoglycan 2 (HSPG2) is for perlecan. In this study, we cloned the cDNA of porcine SDC2 and analyzed its genomic structure. The porcine SDC2 and HSPG2 were mapped to SSC4p12-13 and SSC6q24-25 by the SCHP panel respectively, further IMpRH panel analysis showed that they were most closely linked to the marker SWR362 and SW709. One special domain named the 4.1 m domain (putative band 4.1 homologues' binding motif) was found in the prediction amino acid sequence of porcine SDC2. RT-PCR showed that both of porcine SDC2 and HSPG2 were expressed widely in detected tissues: heart, liver, spleen, lung, kidney, stomach, muscle, fat and lymph. Upon stimulation in healthy Tongcheng piglets with PRRSV, SDC2 mRNA did not induce a prominent change in the PAMs, while HSPG2 mRNA displayed a dramatic decline. In addition, synonymous mutation g.32A>G of the SDC2 gene was detected and confirmed to be significantly associated with hematocrit, mean corpuscular volume and hemoglobin concentration in the peripheral blood (p < 0.05). A single nucleotide polymorphism g.83.A>G was found in the HSPG2 gene and the association analysis showed that it was significantly associated with mean corpuscular hemoglobin (p < 0.05). Our results confirmed the relation of porcine SDC2 and HSPG2 to the immunity in pigs, and these two genes could be used as candidate genes for improving immune traits in industrial pig breeding.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23264070     DOI: 10.1007/s11033-012-2340-2

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  23 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

Review 2.  The role of perlecan in arterial injury and angiogenesis.

Authors:  Amit Segev; Nafiseh Nili; Bradley H Strauss
Journal:  Cardiovasc Res       Date:  2004-09-01       Impact factor: 10.787

Review 3.  Syndecans: new kids on the signaling block.

Authors:  Eugene Tkachenko; John M Rhodes; Michael Simons
Journal:  Circ Res       Date:  2005-03-18       Impact factor: 17.367

4.  Solution structure of a syndecan-4 cytoplasmic domain and its interaction with phosphatidylinositol 4,5-bisphosphate.

Authors:  D Lee; E S Oh; A Woods; J R Couchman; W Lee
Journal:  J Biol Chem       Date:  1998-05-22       Impact factor: 5.157

5.  Members of the syndecan family of heparan sulfate proteoglycans are expressed in distinct cell-, tissue-, and development-specific patterns.

Authors:  C W Kim; O A Goldberger; R L Gallo; M Bernfield
Journal:  Mol Biol Cell       Date:  1994-07       Impact factor: 4.138

6.  Effects of different us isolates of porcine reproductive and respiratory syndrome virus (PRRSV) on blood and bone marrow parameters of experimentally infected pigs.

Authors:  R G Halbur; F J Pallarés; J A Rathje; R Evans; W A Hagemoser; P S Paul; X J Meng
Journal:  Vet Rec       Date:  2002-09-21       Impact factor: 2.695

7.  Involvement of sialoadhesin in entry of porcine reproductive and respiratory syndrome virus into porcine alveolar macrophages.

Authors:  Nathalie Vanderheijden; Peter L Delputte; Herman W Favoreel; Joël Vandekerckhove; Jozef Van Damme; Peter A van Woensel; Hans J Nauwynck
Journal:  J Virol       Date:  2003-08       Impact factor: 5.103

8.  Construction of a whole-genome radiation hybrid panel for high-resolution gene mapping in pigs.

Authors:  M Yerle; P Pinton; A Robic; A Alfonso; Y Palvadeau; C Delcros; R Hawken; L Alexander; C Beattie; L Schook; D Milan; J Gellin
Journal:  Cytogenet Cell Genet       Date:  1998

9.  Molecular characterization of transcriptome-wide interactions between highly pathogenic porcine reproductive and respiratory syndrome virus and porcine alveolar macrophages in vivo.

Authors:  Ping Zhou; Shanli Zhai; Xiang Zhou; Ping Lin; Tengfei Jiang; Xueying Hu; Yunbo Jiang; Bin Wu; Qingde Zhang; Xuewen Xu; Jin-Ping Li; Bang Liu
Journal:  Int J Biol Sci       Date:  2011-08-07       Impact factor: 6.580

Review 10.  Interactions between heparan sulfate and proteins: the concept of specificity.

Authors:  Johan Kreuger; Dorothe Spillmann; Jin-ping Li; Ulf Lindahl
Journal:  J Cell Biol       Date:  2006-07-31       Impact factor: 10.539

View more
  1 in total

Review 1.  The Heparanase Regulatory Network in Health and Disease.

Authors:  Alyce J Mayfosh; Tien K Nguyen; Mark D Hulett
Journal:  Int J Mol Sci       Date:  2021-10-14       Impact factor: 5.923

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.