Literature DB >> 23260129

There and back again: new single-molecule insights in the motion of DNA repair proteins.

Maria Spies1.   

Abstract

Cellular DNA repair machines are constantly at work supporting the integrity of our genomes. Numerous proteins cooperate to form a complex and adaptive system dedicated to detection and timely processing of DNA damage. The molecular underpinnings of how these proteins locate and discriminate DNA lesions, match homologous sequences, mend the DNA and attend to a replication in distress are of a paramount biomedical importance, but in many cases remain unclear. Combined with more conventional tools, single-molecule biochemistry has been stepping in to address the age-old problems in the DNA repair field. This review will address new insights into diffusive properties of three DNA repair systems: I will discuss the emerging model of how MutS homologues locate and respond to mismatches in the dsDNA; the mechanism by which RAD52 promotes annealing of complementary DNA strands coated with ssDNA binding protein RPA; and how the nucleoprotein filament formed by RecA recombinase on ssDNA searches for homology within duplex DNA. These three distinct DNA repair factors exemplify the dynamic nature of cellular DNA repair machines revealed by single-molecule studies.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23260129     DOI: 10.1016/j.sbi.2012.11.008

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  11 in total

1.  Mismatch repair protein hMSH2-hMSH6 recognizes mismatches and forms sliding clamps within a D-loop recombination intermediate.

Authors:  Masayoshi Honda; Yusuke Okuno; Sarah R Hengel; Juana V Martín-López; Christopher P Cook; Ravindra Amunugama; Randal J Soukup; Shyamal Subramanyam; Richard Fishel; Maria Spies
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-06       Impact factor: 11.205

2.  On the influence of protein-DNA register during homologous recombination.

Authors:  Eric C Greene
Journal:  Cell Cycle       Date:  2016       Impact factor: 4.534

Review 3.  Mismatch repair during homologous and homeologous recombination.

Authors:  Maria Spies; Richard Fishel
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-03-02       Impact factor: 10.005

Review 4.  Eukaryotic resectosomes: A single-molecule perspective.

Authors:  Logan R Myler; Ilya J Finkelstein
Journal:  Prog Biophys Mol Biol       Date:  2016-08-03       Impact factor: 3.667

5.  Direct Fluorescent Imaging of Translocation and Unwinding by Individual DNA Helicases.

Authors:  T L Pavankumar; J C Exell; S C Kowalczykowski
Journal:  Methods Enzymol       Date:  2016-10-18       Impact factor: 1.600

Review 6.  Visualizing recombination intermediates with single-stranded DNA curtains.

Authors:  Zhi Qi; Eric C Greene
Journal:  Methods       Date:  2016-03-30       Impact factor: 3.608

Review 7.  Visualizing protein movement on DNA at the single-molecule level using DNA curtains.

Authors:  Timothy D Silverstein; Bryan Gibb; Eric C Greene
Journal:  DNA Repair (Amst)       Date:  2014-03-02

Review 8.  Evolution of small prokaryotic genomes.

Authors:  David J Martínez-Cano; Mariana Reyes-Prieto; Esperanza Martínez-Romero; Laila P Partida-Martínez; Amparo Latorre; Andrés Moya; Luis Delaye
Journal:  Front Microbiol       Date:  2015-01-06       Impact factor: 5.640

9.  Rapid pairing and resegregation of distant homologous loci enables double-strand break repair in bacteria.

Authors:  Anjana Badrinarayanan; Tung B K Le; Michael T Laub
Journal:  J Cell Biol       Date:  2015-08-03       Impact factor: 10.539

10.  The cohesin-like RecN protein stimulates RecA-mediated recombinational repair of DNA double-strand breaks.

Authors:  Lee A Uranga; Emigdio D Reyes; Praveen L Patidar; Lindsay N Redman; Shelley L Lusetti
Journal:  Nat Commun       Date:  2017-05-17       Impact factor: 14.919

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