| Literature DB >> 23249291 |
Yakov Ben-Haim1, Clifford C Dacso, Nicola M Zetola.
Abstract
BACKGROUND: Formulation and evaluation of public health policy commonly employs science-based mathematical models. For instance, epidemiological dynamics of TB is dominated, in general, by flow between actively and latently infected populations. Thus modelling is central in planning public health intervention. However, models are highly uncertain because they are based on observations that are geographically and temporally distinct from the population to which they are applied. AIMS: We aim to demonstrate the advantages of info-gap theory, a non-probabilistic approach to severe uncertainty when worst cases cannot be reliably identified and probability distributions are unreliable or unavailable. Info-gap is applied here to mathematical modelling of epidemics and analysis of public health decision-making.Entities:
Mesh:
Year: 2012 PMID: 23249291 PMCID: PMC3583706 DOI: 10.1186/1471-2458-12-1091
Source DB: PubMed Journal: BMC Public Health ISSN: 1471-2458 Impact factor: 3.295
Model parameters in the Murray-Salomon basic model
| Birth rate g | births/year/person | 0.03 | 0 |
| population size | 0.821 | 0.179 | |
| births per year = birth rate× | | | |
| infection rate | 1.81×10−3 | 2.96×10−3 | |
| # respiratory contacts with infected/person/year | | | |
| probability that respir. contact with infectious source leads to infection | | | |
| | 5–15 | | |
| # infectious cases in population | | | |
| non-TB death rate | 0.009 | 0.05 | |
| proportion of new infections entering slow breakdown | 0.9 (0.85–0.95) | 0.4 (0.3–0.5 | |
| fast breakdown rate | 2 | 3 | |
| slow breakdown rate | 0.001 (5–15×10−4 | 0.075 (0.05–0.10 | |
| rate of application of INH to infected individuals | 0.75 ( | | |
| protection from superinfection conferred by primary infection | 0.75 (0.5–1 | | |
| short-term INH effectiveness | 0.7 | | |
| long-term INH effectiveness | 0.7 | | |
| proportion of pre-diagnosed cases in clinical category | | | |
| | 0.45 (0.4–0.5) | 0.35 (0.3–0.4) | |
| | 0.55 (0.5–0.6) | 0.65 (0.6–0.7) | |
| | | ||
| | |||
| proportion of new cases in clinical category | | | |
| proportion of new cases in clinical category | 0.45 (0.4–0.5 | | |
| proportion of new cases in clinical category | | ||
| diagnosis rate for category | 0.6 | 0.6 | |
| smear conversion rate | 0.03 c |
Model parameters in the Murray-Salomon basic model, Table Two, p.42, in ref. [18], except for K, L, Y and N which are defined in footnote 2 on p.21 of [18]. Where a value is specified only for HIV-negative, the same value is used for HIV-positive.
aFootnote 8, p.24, [18].
bFootnote e, Table A5, p.63, [18].
cTable A5, p.63, [18].
dFootnote c, Table A5, p.63, [18].
eFootnote †, Table A5, p.63, and Figure A5, p.57 [18].
fFootnote b, Table A5, p.63,[18].
gRate: per person per year. In Botswana the average is 477 cases per year per 100,000 people. 62% of them are HIV infected.
hDepends on HIV prevalence. In areas with HIV and without preventive treatment, 25% of babies born from HIV mothers are infected.
iIn Botswana.
j[Dye C, Scheele S, Dolin P, Pathania V, Raviglione MC. Consensus statement. Global burden of tuberculosis: estimated incidence, prevalence, and mortality by country. WHO Global Surveillance and Monitoring Project. JAMA. 1999 Aug 18;282(7):677–86.].
kNot needed since λis a primary datum.
ℓDecision variable.
mCan also be treated as a decision variable.
Model parameters in the Murray-Salomon basic model
| spontaneous cure rate for untreated cases | 0.2 (0.14–0.25) | | |
| TB death rate for untreated cases in clinical category | | | |
| | 0.12 (0.075–0.20 | 0.45 (0.3–0.6 | |
| | |||
| proportion of treated cases in clinical category | | | |
| | 0.5 | | |
| | 0.28 | | |
| | | ||
| | | ||
| cure rate for treated case in treatment category | | | |
| | 0.8 | | |
| | 0.5 | | |
| TB death rate for treated cases in clinical category | | | |
| | 0.075 | 0.16 | |
| | 0.12 | 0.24 | |
| | |||
| proportion of spontaneously recovered cases entering the slow relapse category | 0.009 | | |
| proportion of recovered cases from treatment category | | | |
| | 0.0096 | | |
| | 0.0094 | | |
| fast relapse rate | 2 | 3 | |
| slow relapse rate | 0.001 (5–15×10−4 | | |
| rate of HIV infection | 0.075 (0.011–0.95) |
Model parameters in the Murray-Salomon basic model, Table Two, p.42, in ref. [18], except for K, L, Y and N which are defined in footnote 2 on p.21 of [18]. Where a value is specified only for HIV-negative, the same value is used for HIV-positive.
aFootnote 8, p.24, [18].
bFootnote e, Table A5, p.63, [18].
cTable A5, p.63, [18].
dFootnote †, Table A5, p.63, and Figure A4, p.56 [18].
eFootnote d, Table A5, p.63, [18].
fRate: per person per year.
g[33,34]. Other estimate: 0.05–0.15.
h[1].
Initial conditions
| | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| | | |||||||||
| 1 | 0.9 | 0.8 | 0.6 | 0.8 | 0.650 | 0.500 | 0.6 | 0.5 | 0.4 | |
| 2 | 0.0075 | 0.015 | 0.03 | 0.011 | 0.018 | 0.028 | 0.03 | 0.0375 | 0.045 | |
| 3 | 0.03 | 0.06 | 0.12 | 0.05 | 0.088 | 0.125 | 0.12 | 0.15 | 0.18 | |
| 4 | 0.003 | 0.006 | 0.012 | 0.01 | 0.018 | 0.025 | 0.012 | 0.015 | 0.018 | |
| 5 | 0.009 | 0.018 | 0.036 | 0.02 | 0.035 | 0.050 | 0.036 | 0.045 | 0.054 | |
| | | | | | | | | | | |
| 6 | ( | 0.005 | 0.01 | 0.02 | 0.008 | 0.014 | 0.020 | 0.02 | 0.025 | 0.03 |
| 7 | ( | 0.002 | 0.004 | 0.008 | 0.003 | 0.005 | 0.008 | 0.008 | 0.01 | 0.012 |
| 8 | ( | 0.002 | 0.004 | 0.008 | 0.003 | 0.005 | 0.008 | 0.008 | 0.01 | 0.012 |
| 9 | ( | 0.002 | 0.004 | 0.008 | 0.003 | 0.005 | 0.008 | 0.008 | 0.01 | 0.012 |
| 10 | ( | 0.001 | 0.002 | 0.004 | 0.002 | 0.004 | 0.005 | 0.004 | 0.005 | 0.006 |
| 11 | ( | 0.001 | 0.002 | 0.004 | 0.002 | 0.004 | 0.005 | 0.004 | 0.005 | 0.006 |
| | | | | | | | | | | |
| 12 | ( | 0.01 | 0.02 | 0.04 | 0.02 | 0.035 | 0.050 | 0.04 | 0.05 | 0.06 |
| 13 | ( | 0.005 | 0.01 | 0.02 | 0.01 | 0.018 | 0.025 | 0.02 | 0.025 | 0.03 |
| 14 | ( | 0.005 | 0.01 | 0.02 | 0.01 | 0.018 | 0.025 | 0.02 | 0.025 | 0.03 |
| 15 | ( | 0.005 | 0.01 | 0.02 | 0.02 | 0.035 | 0.050 | 0.02 | 0.025 | 0.03 |
| 16 | ( | 0.002 | 0.004 | 0.008 | 0.005 | 0.009 | 0.013 | 0.008 | 0.01 | 0.012 |
| 17 | ( | 0.0025 | 0.005 | 0.01 | 0.003 | 0.005 | 0.008 | 0.01 | 0.0125 | 0.015 |
| 18 | 0.002 | 0.004 | 0.008 | 0.005 | 0.009 | 0.013 | 0.008 | 0.01 | 0.012 | |
| 19 | 0.006 | 0.012 | 0.024 | 0.015 | 0.025 | 0.038 | 0.024 | 0.03 | 0.036 | |
| 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | ||
Figure 1Robustness of relative TB prevalence. Run 8.
Nominal values and error weights of uncertain variables
| 1.81×10−3 | 0.0009 | |
| 2.96×10−3 | 0.0018 | |
| 0.075 | 0.2 | |
| 0.001 | 0.0005 | |
| 0.001 | 0.001 | |
| 2 | 1 | |
| 3 | 1.5 |
Figure 2Relative TB prevalence vs. time. Run 8.
Figure 3Relative relapses vs. time. Run 8.
Figure 4Equivalent robustness for two interventions. Run 8: —, run 15: – –.
Control variables for robustness curves
| 8 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 9 | 1 | 10 | (0.65, 0.65) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 10 | 1 | 10 | (0.65, 0.65) | (0.88, 0.55) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 11 | 1 | 10 | (0.65, 0.65) | (0.88, 0.55) | 1.5 | 2.25 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 12 | 1 | 10 | (0.65, 0.65) | (0.88, 0.55) | 1 | 1.5 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 15 | 1 | 10 | (0.85, 0.85) | (0.8, 0.5) | 1.2 | 2 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 19 | 5 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 21 | 5 | 10 | (0.65, 0.65) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 22 | 5 | 10 | (0.65, 0.65) | (0.88, 0.55) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 23 | 5 | 10 | (0.65, 0.65) | (0.88, 0.55) | 1 | 1.5 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 20 | 9 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 24 | 9 | 10 | (0.65, 0.65) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 25 | 9 | 10 | (0.65, 0.65) | (0.88, 0.55) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 26 | 9 | 10 | (0.65, 0.65) | (0.88, 0.55) | 1 | 1.5 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 27 | 1 | 20 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 28 | 1 | 30 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 29 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.0375 | 2 | 3 | |
| 30 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.05 | 2 | 3 | |
| 31 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.06 | 2 | 3 | |
| 32 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.0009 | 0.00148 | 0.075 | 2 | 3 | |
| 33 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.0003 | 0.0005 | 0.075 | 2 | 3 | |
| 38 | 1 | 30 | (0.85, 0.85) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 2 | 3 | |
| 39 | 1 | 10 | (0.6, 0.6) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 1 | 1.5 | |
| 41 | 1 | 10 | (0.65, 0.65) | (0.8, 0.5) | 2 | 3 | 0.00181 | 0.00296 | 0.075 | 1 | 1.5 |
aData-column in Table 3.
Figure 5Robustness curves at 10, 20 and 30 years. Run 8: —, run 27: – –, run 28: ·–.
Figure 6Nominal equivalence of two interventions. Run12: —, run 38: – –.
Figure 7Robustness curves for low, medium and high initial TB and HIV prevalence. Run 8: —, run 19: – – run 20: ·–.
Figure 8Robustness with varying aggressiveness. Run 8: —, run 9: – –, run 10:·–, run 12: ⋯.
Figure 9Robustness for various HIV infection rates. Run 8: —, run 31: – –, run 30: ·–, run 29: ⋯.
State variables—sizes of sub-populations—in the Murray-Salomon basic model, Table One, p.41, in ref. [[18]]
| | | | |||
| 1 | Uninfected | 0.9b | 0.2c | [ | |
| 2 | Infected subject to fast breakdown | 0.05–0.1 | 0.1 | [ | |
| 3 | Infected subject to slow breakdown | 0.1 | 0.1 | [ | |
| 4 | Superinfected subject to fast breakdown | 0 | | | |
| 5 | INH recipient subject to slow breakdown | 0.01 | 0.01–0.03 | | |
| 6–11 | Untreated cases, of 6 types: | 0 | | | |
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| 12–17 | Treated cases, of 6 types: | 0 | | | |
| | | | | | |
| | | | | | |
| | | | | | |
| 18 | Recovered cases subject to fast relapse | 0.4 (0.28–0.52) | | [ | |
| 19 | Recovered cases subject to slow relapse | 0.050 (0.035–0.065) | [ | ||
The definition of superscript i⋆is in [18] on p.20.
aAs fraction of total population at start of simulation.
bLow prevalence.
cHigh prevalence.