Literature DB >> 23246446

Does the lipid environment impact the open-state conductance of an engineered β-barrel protein nanopore?

Noriko Tomita1, Mohammad M Mohammad, David J Niedzwiecki, Makoto Ohta, Liviu Movileanu.   

Abstract

Using rational membrane protein design, we were recently able to obtain a β-barrel protein nanopore that was robust under an unusually broad range of experimental circumstances. This protein nanopore was based upon the native scaffold of the bacterial ferric hydroxamate uptake component A (FhuA) of Escherichia coli. In this work, we expanded the examinations of the open-state current of this engineered protein nanopore, also called FhuA ΔC/Δ4L, employing an array of lipid bilayer systems that contained charged and uncharged as well as conical and cylindrical lipids. Remarkably, systematical single-channel analysis of FhuA ΔC/Δ4L indicated that most of its biophysical features, such as the unitary conductance and the stability of the open-state current, were not altered under the conditions tested in this work. However, electrical recordings at high transmembrane potentials revealed that the presence of conical phospholipids within the bilayer catalyzes the first, stepwise current transition of the FhuA ΔC/Δ4L protein nanopore to a lower-conductance open state. This study reinforces the stability of the open-state current of the engineered FhuA ΔC/Δ4L protein nanopore under various experimental conditions, paving the way for further critical developments in biosensing and molecular biomedical diagnosis.
Copyright © 2012 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23246446      PMCID: PMC3560310          DOI: 10.1016/j.bbamem.2012.12.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  74 in total

Review 1.  Folding and assembly of beta-barrel membrane proteins.

Authors:  Lukas K Tamm; Heedeok Hong; Binyong Liang
Journal:  Biochim Biophys Acta       Date:  2004-11-03

2.  Biophysics of T5, IRA phages, Escherichia coli outer membrane protein FhuA and T5-FhuA interaction.

Authors:  T Mdzinarashvili; M Khvedelidze; A Ivanova; G Mrevlishvili; M Kutateladze; N Balarjishvili; H Celia; F Pattus
Journal:  Eur Biophys J       Date:  2005-12-09       Impact factor: 1.733

3.  Lysenin forms a voltage-dependent channel in artificial lipid bilayer membranes.

Authors:  Toru Ide; Takaaki Aoki; Yuko Takeuchi; Toshio Yanagida
Journal:  Biochem Biophys Res Commun       Date:  2006-05-26       Impact factor: 3.575

Review 4.  Engineering protein and peptide building blocks for nanotechnology.

Authors:  Scott Banta; Zaki Megeed; Monica Casali; Kaushal Rege; Martin L Yarmush
Journal:  J Nanosci Nanotechnol       Date:  2007-02

5.  Structure refinement of the OpcA adhesin using molecular dynamics.

Authors:  Binquan Luan; Martin Caffrey; Aleksei Aksimentiev
Journal:  Biophys J       Date:  2007-11-01       Impact factor: 4.033

6.  Gating and conductance changes in BK(Ca) channels in bilayers are reciprocal.

Authors:  Robert J O'Connell; Chunbo Yuan; Linda J Johnston; Olga Rinco; Ira Probodh; Steven N Treistman
Journal:  J Membr Biol       Date:  2007-04-28       Impact factor: 1.843

7.  Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes.

Authors:  K P Locher; B Rees; R Koebnik; A Mitschler; L Moulinier; J P Rosenbusch; D Moras
Journal:  Cell       Date:  1998-12-11       Impact factor: 41.582

8.  The beta-barrel domain of FhuADelta5-160 is sufficient for TonB-dependent FhuA activities of Escherichia coli.

Authors:  M Braun; H Killmann; V Braun
Journal:  Mol Microbiol       Date:  1999-09       Impact factor: 3.501

9.  Structure of TonB in complex with FhuA, E. coli outer membrane receptor.

Authors:  Peter D Pawelek; Nathalie Croteau; Christopher Ng-Thow-Hing; Cezar M Khursigara; Natalia Moiseeva; Marc Allaire; James W Coulton
Journal:  Science       Date:  2006-06-02       Impact factor: 47.728

Review 10.  How lipids affect the activities of integral membrane proteins.

Authors:  Anthony G Lee
Journal:  Biochim Biophys Acta       Date:  2004-11-03
View more
  4 in total

1.  Microsecond-timescale simulations suggest 5-HT-mediated preactivation of the 5-HT3A serotonin receptor.

Authors:  Nicholas B Guros; Arvind Balijepalli; Jeffery B Klauda
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-23       Impact factor: 11.205

2.  Quantification of Membrane Protein-Detergent Complex Interactions.

Authors:  Aaron J Wolfe; Wei Si; Zhengqi Zhang; Adam R Blanden; Yi-Ching Hsueh; Jack F Gugel; Bach Pham; Min Chen; Stewart N Loh; Sharon Rozovsky; Aleksei Aksimentiev; Liviu Movileanu
Journal:  J Phys Chem B       Date:  2017-10-31       Impact factor: 2.991

3.  The Role of Lipid Interactions in Simulations of the α-Hemolysin Ion-Channel-Forming Toxin.

Authors:  Nicholas B Guros; Arvind Balijepalli; Jeffery B Klauda
Journal:  Biophys J       Date:  2018-09-18       Impact factor: 4.033

4.  The Transmembrane Domain of a Bicomponent ABC Transporter Exhibits Channel-Forming Activity.

Authors:  Mohammad M Mohammad; Noriko Tomita; Makoto Ohta; Liviu Movileanu
Journal:  ACS Chem Biol       Date:  2016-07-19       Impact factor: 5.100

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.