Literature DB >> 23244056

Probing enzymatic activity inside living cells using a nanowire-cell "sandwich" assay.

Yu-Ran Na1, So Yeon Kim, Jellert T Gaublomme, Alex K Shalek, Marsela Jorgolli, Hongkun Park, Eun Gyeong Yang.   

Abstract

Developing a detailed understanding of enzyme function in the context of an intracellular signal transduction pathway requires minimally invasive methods for probing enzyme activity in situ. Here, we describe a new method for monitoring enzyme activity in living cells by sandwiching live cells between two vertical silicon nanowire (NW) arrays. Specifically, we use the first NW array to immobilize the cells and then present enzymatic substrates intracellularly via the second NW array by utilizing the NWs' ability to penetrate cellular membranes without affecting cells' viability or function. This strategy, when coupled with fluorescence microscopy and mass spectrometry, enables intracellular examination of protease, phosphatase, and protein kinase activities, demonstrating the assay's potential in uncovering the physiological roles of various enzymes.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23244056      PMCID: PMC3541459          DOI: 10.1021/nl3037068

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  47 in total

1.  Profiling kinase activities by using a peptide chip and mass spectrometry.

Authors:  Dal-Hee Min; Jing Su; Milan Mrksich
Journal:  Angew Chem Int Ed Engl       Date:  2004-11-12       Impact factor: 15.336

Review 2.  FRET-based biosensors for protein kinases: illuminating the kinome.

Authors:  Jin Zhang; Michael D Allen
Journal:  Mol Biosyst       Date:  2007-08-21

Review 3.  Visualization of growth signal transduction cascades in living cells with genetically encoded probes based on Förster resonance energy transfer.

Authors:  Kazuhiro Aoki; Etsuko Kiyokawa; Takeshi Nakamura; Michiyuki Matsuda
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-06-27       Impact factor: 6.237

4.  Multimodal optical sensing and analyte specificity using single-walled carbon nanotubes.

Authors:  Daniel A Heller; Hong Jin; Brittany M Martinez; Dhaval Patel; Brigid M Miller; Tsun-Kwan Yeung; Prakrit V Jena; Claudia Höbartner; Taekjip Ha; Scott K Silverman; Michael S Strano
Journal:  Nat Nanotechnol       Date:  2008-12-14       Impact factor: 39.213

Review 5.  Fluorescent probes for bioimaging applications.

Authors:  Takuya Terai; Tetsuo Nagano
Journal:  Curr Opin Chem Biol       Date:  2008-10       Impact factor: 8.822

6.  Measurement of two caspase activities simultaneously in living cells by a novel dual FRET fluorescent indicator probe.

Authors:  Xiaoli Wu; James Simone; Derek Hewgill; Richard Siegel; Peter E Lipsky; Liusheng He
Journal:  Cytometry A       Date:  2006-06       Impact factor: 4.355

Review 7.  Functional imaging of proteases: recent advances in the design and application of substrate-based and activity-based probes.

Authors:  Laura E Edgington; Martijn Verdoes; Matthew Bogyo
Journal:  Curr Opin Chem Biol       Date:  2011-11-16       Impact factor: 8.822

8.  Assays of endogenous caspase activities: a comparison of mass spectrometry and fluorescence formats.

Authors:  Jing Su; Tharinda W Rajapaksha; Marcus E Peter; Milan Mrksich
Journal:  Anal Chem       Date:  2006-07-15       Impact factor: 6.986

9.  Flexible electrical recording from cells using nanowire transistor arrays.

Authors:  Tzahi Cohen-Karni; Brian P Timko; Lucien E Weiss; Charles M Lieber
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-13       Impact factor: 11.205

10.  Probing cellular protein complexes using single-molecule pull-down.

Authors:  Ankur Jain; Ruijie Liu; Biswarathan Ramani; Edwin Arauz; Yuji Ishitsuka; Kaushik Ragunathan; Jeehae Park; Jie Chen; Yang K Xiang; Taekjip Ha
Journal:  Nature       Date:  2011-05-26       Impact factor: 49.962

View more
  19 in total

1.  Nanoneedle-Based Materials for Intracellular Studies.

Authors:  Julia E Sero; Molly M Stevens
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Nondestructive nanostraw intracellular sampling for longitudinal cell monitoring.

Authors:  Yuhong Cao; Martin Hjort; Haodong Chen; Fikri Birey; Sergio A Leal-Ortiz; Crystal M Han; Juan G Santiago; Sergiu P Paşca; Joseph C Wu; Nicholas A Melosh
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

Review 3.  Roadmap on semiconductor-cell biointerfaces.

Authors:  Bozhi Tian; Shuai Xu; John A Rogers; Stefano Cestellos-Blanco; Peidong Yang; João L Carvalho-de-Souza; Francisco Bezanilla; Jia Liu; Zhenan Bao; Martin Hjort; Yuhong Cao; Nicholas Melosh; Guglielmo Lanzani; Fabio Benfenati; Giulia Galli; Francois Gygi; Rylan Kautz; Alon A Gorodetsky; Samuel S Kim; Timothy K Lu; Polina Anikeeva; Michal Cifra; Ondrej Krivosudský; Daniel Havelka; Yuanwen Jiang
Journal:  Phys Biol       Date:  2018-03-09       Impact factor: 2.583

4.  Quantification of nanowire penetration into living cells.

Authors:  Alexander M Xu; Amin Aalipour; Sergio Leal-Ortiz; Armen H Mekhdjian; Xi Xie; Alexander R Dunn; Craig C Garner; Nicholas A Melosh
Journal:  Nat Commun       Date:  2014-04-07       Impact factor: 14.919

Review 5.  Tutorial: using nanoneedles for intracellular delivery.

Authors:  Ciro Chiappini; Yaping Chen; Stella Aslanoglou; Anna Mariano; Valentina Mollo; Huanwen Mu; Enrica De Rosa; Gen He; Ennio Tasciotti; Xi Xie; Francesca Santoro; Wenting Zhao; Nicolas H Voelcker; Roey Elnathan
Journal:  Nat Protoc       Date:  2021-08-23       Impact factor: 17.021

6.  Nanowire Assisted Mechanotyping of Cellular Metastatic Potential.

Authors:  Debadrita Paria; Annalisa Convertino; Piyush Raj; Kristine Glunde; Yun Chen; Ishan Barman
Journal:  Adv Funct Mater       Date:  2021-05-21       Impact factor: 19.924

Review 7.  Micro/nanofabricated platforms for oral drug delivery.

Authors:  Cade B Fox; Jean Kim; Long V Le; Cameron L Nemeth; Hariharasudhan D Chirra; Tejal A Desai
Journal:  J Control Release       Date:  2015-08-02       Impact factor: 9.776

Review 8.  Micro- and Nanoscale Technologies for Delivery into Adherent Cells.

Authors:  Wonmo Kang; Rebecca L McNaughton; Horacio D Espinosa
Journal:  Trends Biotechnol       Date:  2016-06-07       Impact factor: 19.536

9.  Biodegradable nanoneedles for localized delivery of nanoparticles in vivo: exploring the biointerface.

Authors:  Ennio Tasciotti; Molly M Stevens; Ciro Chiappini; Jonathan O Martinez; Enrica De Rosa; Carina S Almeida
Journal:  ACS Nano       Date:  2015-04-17       Impact factor: 15.881

10.  Biodegradable silicon nanoneedles delivering nucleic acids intracellularly induce localized in vivo neovascularization.

Authors:  C Chiappini; E De Rosa; J O Martinez; X Liu; J Steele; M M Stevens; E Tasciotti
Journal:  Nat Mater       Date:  2015-03-30       Impact factor: 43.841

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.