Literature DB >> 23242686

Analysing the spatial patterns of livestock anthrax in Kazakhstan in relation to environmental factors: a comparison of local (Gi*) and morphology cluster statistics.

Ian T Kracalik1, Jason K Blackburn, Larisa Lukhnova, Yerlan Pazilov, Martin E Hugh-Jones, Alim Aikimbayev.   

Abstract

We compared a local clustering and a cluster morphology statistic using anthrax outbreaks in large (cattle) and small (sheep and goats) domestic ruminants across Kazakhstan. The Getis-Ord (Gi*) statistic and a multidirectional optimal ecotope algorithm (AMOEBA) were compared using 1st, 2nd and 3rd order Rook contiguity matrices. Multivariate statistical tests were used to evaluate the environmental signatures between clusters and non-clusters from the AMOEBA and Gi* tests. A logistic regression was used to define a risk surface for anthrax outbreaks and to compare agreement between clustering methodologies. Tests revealed differences in the spatial distribution of clusters as well as the total number of clusters in large ruminants for AMOEBA (n = 149) and for small ruminants (n = 9). In contrast, Gi* revealed fewer large ruminant clusters (n = 122) and more small ruminant clusters (n = 61). Significant environmental differences were found between groups using the Kruskall-Wallis and Mann-Whitney U tests. Logistic regression was used to model the presence/absence of anthrax outbreaks and define a risk surface for large ruminants to compare with cluster analyses. The model predicted 32.2% of the landscape as high risk. Approximately 75% of AMOEBA clusters corresponded to predicted high risk, compared with ~64% of Gi* clusters. In general, AMOEBA predicted more irregularly shaped clusters of outbreaks in both livestock groups, while Gi* tended to predict larger, circular clusters. Here we provide an evaluation of both tests and a discussion of the use of each to detect environmental conditions associated with anthrax outbreak clusters in domestic livestock. These findings illustrate important differences in spatial statistical methods for defining local clusters and highlight the importance of selecting appropriate levels of data aggregation.

Entities:  

Mesh:

Year:  2012        PMID: 23242686     DOI: 10.4081/gh.2012.110

Source DB:  PubMed          Journal:  Geospat Health        ISSN: 1827-1987            Impact factor:   1.212


  13 in total

1.  Long-term changes in the spatial distribution of lumpy skin disease hotspots in Zimbabwe.

Authors:  Samuel Swiswa; Mhosisi Masocha; Davies M Pfukenyi; Solomon Dhliwayo; Silvester M Chikerema
Journal:  Trop Anim Health Prod       Date:  2016-10-26       Impact factor: 1.559

2.  Modeling the Ecological Niche of Bacillus anthracis to Map Anthrax Risk in Kyrgyzstan.

Authors:  Jason K Blackburn; Saitbek Matakarimov; Sabira Kozhokeeva; Zhyldyz Tagaeva; Lindsay K Bell; Ian T Kracalik; Asankadyr Zhunushov
Journal:  Am J Trop Med Hyg       Date:  2017-04-06       Impact factor: 2.345

3.  Bacillus anthracis Diversity and Geographic Potential across Nigeria, Cameroon and Chad: Further Support of a Novel West African Lineage.

Authors:  Jason K Blackburn; Moses Ode Odugbo; Matthew Van Ert; Bob O'Shea; Jocelyn Mullins; Vincent Perreten; Vincent Perrenten; Angaya Maho; Martin Hugh-Jones; Ted Hadfield
Journal:  PLoS Negl Trop Dis       Date:  2015-08-20

4.  Human cutaneous anthrax, Georgia 2010-2012.

Authors:  Ian Kracalik; Lile Malania; Nikoloz Tsertsvadze; Julietta Manvelyan; Lela Bakanidze; Paata Imnadze; Shota Tsanava; Jason K Blackburn
Journal:  Emerg Infect Dis       Date:  2014-02       Impact factor: 6.883

5.  Evidence of local persistence of human anthrax in the country of georgia associated with environmental and anthropogenic factors.

Authors:  Ian T Kracalik; Lile Malania; Nikoloz Tsertsvadze; Julietta Manvelyan; Lela Bakanidze; Paata Imnadze; Shota Tsanava; Jason K Blackburn
Journal:  PLoS Negl Trop Dis       Date:  2013-09-05

6.  Ecological niche modeling of Bacillus anthracis on three continents: evidence for genetic-ecological divergence?

Authors:  Jocelyn C Mullins; Giuliano Garofolo; Matthew Van Ert; Antonio Fasanella; Larisa Lukhnova; Martin E Hugh-Jones; Jason K Blackburn
Journal:  PLoS One       Date:  2013-08-19       Impact factor: 3.240

7.  Changing patterns of human anthrax in Azerbaijan during the post-Soviet and preemptive livestock vaccination eras.

Authors:  Ian Kracalik; Rakif Abdullayev; Kliment Asadov; Rita Ismayilova; Mehriban Baghirova; Narmin Ustun; Mazahir Shikhiyev; Aydin Talibzade; Jason K Blackburn
Journal:  PLoS Negl Trop Dis       Date:  2014-07-17

8.  Spatio-temporal patterns of an anthrax outbreak in white-tailed deer, Odocoileus virginanus, and associated genetic diversity of Bacillus anthracis.

Authors:  Jocelyn C Mullins; Matthew Van Ert; Ted Hadfield; Mikeljon P Nikolich; Martin E Hugh-Jones; Jason K Blackburn
Journal:  BMC Ecol       Date:  2015-12-15       Impact factor: 2.964

Review 9.  Biothreat Reduction and Economic Development: The Case of Animal Husbandry in Central Asia.

Authors:  Robert Walker; Jason Blackburn
Journal:  Front Public Health       Date:  2015-12-23

Review 10.  Applying Science: Opportunities to Inform Disease Management Policy with Cooperative Research within a One Health Framework.

Authors:  Jason K Blackburn; Ian T Kracalik; Jeanne Marie Fair
Journal:  Front Public Health       Date:  2016-01-08
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.