Literature DB >> 23239734

Rapid folding of DNA into nanoscale shapes at constant temperature.

Jean-Philippe J Sobczak1, Thomas G Martin, Thomas Gerling, Hendrik Dietz.   

Abstract

We demonstrate that, at constant temperature, hundreds of DNA strands can cooperatively fold a long template DNA strand within minutes into complex nanoscale objects. Folding occurred out of equilibrium along nucleation-driven pathways at temperatures that could be influenced by the choice of sequences, strand lengths, and chain topology. Unfolding occurred in apparent equilibrium at higher temperatures than those for folding. Folding at optimized constant temperatures enabled the rapid production of three-dimensional DNA objects with yields that approached 100%. The results point to similarities with protein folding in spite of chemical and structural differences. The possibility for rapid and high-yield assembly will enable DNA nanotechnology for practical applications.

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Year:  2012        PMID: 23239734     DOI: 10.1126/science.1229919

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  66 in total

1.  Guiding the folding pathway of DNA origami.

Authors:  Katherine E Dunn; Frits Dannenberg; Thomas E Ouldridge; Marta Kwiatkowska; Andrew J Turberfield; Jonathan Bath
Journal:  Nature       Date:  2015-08-19       Impact factor: 49.962

2.  Folding and Characterization of a Bio-responsive Robot from DNA Origami.

Authors:  Yaniv Amir; Almogit Abu-Horowitz; Ido Bachelet
Journal:  J Vis Exp       Date:  2015-12-03       Impact factor: 1.355

3.  Nanomanufacturing: A Perspective.

Authors:  J Alexander Liddle; Gregg M Gallatin
Journal:  ACS Nano       Date:  2016-02-22       Impact factor: 15.881

4.  Model-driven optimization of multicomponent self-assembly processes.

Authors:  Peter A Korevaar; Christophe Grenier; Albert J Markvoort; Albertus P H J Schenning; Tom F A de Greef; E W Meijer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

5.  In situ structure and dynamics of DNA origami determined through molecular dynamics simulations.

Authors:  Jejoong Yoo; Aleksei Aksimentiev
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-25       Impact factor: 11.205

6.  Rational design of self-assembly pathways for complex multicomponent structures.

Authors:  William M Jacobs; Aleks Reinhardt; Daan Frenkel
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-04       Impact factor: 11.205

Review 7.  Engineering artificial machines from designable DNA materials for biomedical applications.

Authors:  Hao Qi; Guoyou Huang; Yulong Han; Xiaohui Zhang; Yuhui Li; Belinda Pingguan-Murphy; Tian Jian Lu; Feng Xu; Lin Wang
Journal:  Tissue Eng Part B Rev       Date:  2015-02-09       Impact factor: 6.389

8.  Super-resolution microscopy with DNA-PAINT.

Authors:  Joerg Schnitzbauer; Maximilian T Strauss; Thomas Schlichthaerle; Florian Schueder; Ralf Jungmann
Journal:  Nat Protoc       Date:  2017-05-18       Impact factor: 13.491

9.  DNA origami-based standards for quantitative fluorescence microscopy.

Authors:  Jürgen J Schmied; Mario Raab; Carsten Forthmann; Enrico Pibiri; Bettina Wünsch; Thorben Dammeyer; Philip Tinnefeld
Journal:  Nat Protoc       Date:  2014-05-15       Impact factor: 13.491

10.  Nanoswitch-linked immunosorbent assay (NLISA) for fast, sensitive, and specific protein detection.

Authors:  Clinton H Hansen; Darren Yang; Mounir A Koussa; Wesley P Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-11       Impact factor: 11.205

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