Literature DB >> 23237704

Molten globules, entropy-driven conformational change and protein folding.

Robert L Baldwin1, George D Rose.   

Abstract

The exquisite side chain close-packing in the protein core and at binding interfaces has prompted a conviction that packing selectivity is the primary mechanism for molecular recognition in folding and/or binding reactions. Contrary to this view, molten globule proteins can adopt native topology and bind targets tightly and specifically in the absence of side chain close-packing. The molten globule is a highly dynamic form with native-like secondary structure and a loose protein core that admits solvent. The related (but still controversial) dry molten globule is an expanded form of the native protein with largely intact topology but a tighter protein core that excludes solvent. Neither form retains side chain close-packing, and therefore both structure and function must result from other factors, assuming that the reality of the dry molten globule is accepted. This simplifying realization calls for a re-evaluation of established models.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23237704     DOI: 10.1016/j.sbi.2012.11.004

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  37 in total

1.  The Effect of pH on Globular State of Lipase-3646; an Appropriate Model for Molten Globule Investigations.

Authors:  Bahram Pooreydy Golaki; Saeed Aminzadeh; Ali Asghar Karkhane; Bagher Yakhchali; Parisa Farrokh; Ferdous Rastgar Jazii; Mohammadsadegh Nadimifar
Journal:  Protein J       Date:  2015-08       Impact factor: 2.371

2.  Unfolding of a small protein proceeds via dry and wet globules and a solvated transition state.

Authors:  Saswata Sankar Sarkar; Jayant B Udgaonkar; Guruswamy Krishnamoorthy
Journal:  Biophys J       Date:  2013-11-19       Impact factor: 4.033

3.  Circular dichroism and site-directed spin labeling reveal structural and dynamical features of high-pressure states of myoglobin.

Authors:  Michael T Lerch; Joseph Horwitz; John McCoy; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-18       Impact factor: 11.205

4.  Probing the protein-folding mechanism using denaturant and temperature effects on rate constants.

Authors:  Emily J Guinn; Wayne S Kontur; Oleg V Tsodikov; Irina Shkel; M Thomas Record
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

5.  Competition between Coiled-Coil Structures and the Impact on Myosin-10 Bundle Selection.

Authors:  Kevin C Vavra; Youlin Xia; Ronald S Rock
Journal:  Biophys J       Date:  2016-06-07       Impact factor: 4.033

6.  The N-Terminal Domain of Ribosomal Protein L9 Folds via a Diffuse and Delocalized Transition State.

Authors:  Satoshi Sato; Jae-Hyun Cho; Ivan Peran; Rengin G Soydaner-Azeloglu; Daniel P Raleigh
Journal:  Biophys J       Date:  2017-05-09       Impact factor: 4.033

7.  Mapping protein conformational heterogeneity under pressure with site-directed spin labeling and double electron-electron resonance.

Authors:  Michael T Lerch; Zhongyu Yang; Evan K Brooks; Wayne L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-18       Impact factor: 11.205

8.  Evidence for close side-chain packing in an early protein folding intermediate previously assumed to be a molten globule.

Authors:  Laura E Rosen; Katelyn B Connell; Susan Marqusee
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-25       Impact factor: 11.205

9.  Plasticity in oligomerization, operator architecture, and DNA binding in the mode of action of a bacterial B12-based photoreceptor.

Authors:  Jesús Fernández-Zapata; Ricardo Pérez-Castaño; Juan Aranda; Francesco Colizzi; María Carmen Polanco; Modesto Orozco; S Padmanabhan; Montserrat Elías-Arnanz
Journal:  J Biol Chem       Date:  2018-09-27       Impact factor: 5.157

10.  Nucleotide-free kinesin motor domains reversibly convert to an inactive conformation with characteristics of a molten globule.

Authors:  David D Hackney; Marshall S McGoff
Journal:  Arch Biochem Biophys       Date:  2016-08-26       Impact factor: 4.013

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