Literature DB >> 23233670

Disruption of ionic interactions between the nucleotide binding domain 1 (NBD1) and middle (M) domain in Hsp100 disaggregase unleashes toxic hyperactivity and partial independence from Hsp70.

Natalia Lipińska1, Szymon Ziętkiewicz, Alicja Sobczak, Agnieszka Jurczyk, Wojciech Potocki, Ewa Morawiec, Aleksandra Wawrzycka, Krzysztof Gumowski, Magdalena Ślusarz, Sylwia Rodziewicz-Motowidło, Elżbieta Chruściel, Krzysztof Liberek.   

Abstract

Hsp100 chaperones cooperate with the Hsp70 chaperone system to disaggregate and reactivate heat-denatured aggregated proteins to promote cell survival after heat stress. The homology models of Hsp100 disaggregases suggest the presence of a conserved network of ionic interactions between the first nucleotide binding domain (NBD1) and the coiled-coil middle subdomain, the signature domain of disaggregating chaperones. Mutations intended to disrupt the putative ionic interactions in yeast Hsp104 and bacterial ClpB disaggregases resulted in remarkable changes of their biochemical properties. These included an increase in ATPase activity, a significant increase in the rate of in vitro substrate renaturation, and partial independence from the Hsp70 chaperone in disaggregation. Paradoxically, the increased activities resulted in serious growth impediments in yeast and bacterial cells instead of improvement of their thermotolerance. Our results suggest that this toxic activity is due to the ability of the mutated disaggregases to unfold independently from Hsp70, native folded proteins. Complementary changes that restore particular salt bridges within the suggested network suppressed the toxic effects. We propose a novel structural aspect of Hsp100 chaperones crucial for specificity and efficiency of the disaggregation reaction.

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Year:  2012        PMID: 23233670      PMCID: PMC3554950          DOI: 10.1074/jbc.M112.387589

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  49 in total

1.  Mitochondrial Hsp78, a member of the Clp/Hsp100 family in Saccharomyces cerevisiae, cooperates with Hsp70 in protein refolding.

Authors:  J Krzewska; T Langer; K Liberek
Journal:  FEBS Lett       Date:  2001-01-26       Impact factor: 4.124

2.  The structure of ClpB: a molecular chaperone that rescues proteins from an aggregated state.

Authors:  Sukyeong Lee; Mathew E Sowa; Yo-hei Watanabe; Paul B Sigler; Wah Chiu; Masasuke Yoshida; Francis T F Tsai
Journal:  Cell       Date:  2003-10-17       Impact factor: 41.582

3.  Substrate recognition by the AAA+ chaperone ClpB.

Authors:  Christian Schlieker; Jimena Weibezahn; Holger Patzelt; Peter Tessarz; Christine Strub; Kornelius Zeth; Annette Erbse; Jens Schneider-Mergener; Jason W Chin; Peter G Schultz; Bernd Bukau; Axel Mogk
Journal:  Nat Struct Mol Biol       Date:  2004-06-20       Impact factor: 15.369

4.  Dominant gain-of-function mutations in Hsp104p reveal crucial roles for the middle region.

Authors:  Eric C Schirmer; Oliver R Homann; Anthony S Kowal; Susan Lindquist
Journal:  Mol Biol Cell       Date:  2004-02-20       Impact factor: 4.138

5.  The elimination of the yeast [PSI+] prion by guanidine hydrochloride is the result of Hsp104 inactivation.

Authors:  P C Ferreira; F Ness; S R Edwards; B S Cox; M F Tuite
Journal:  Mol Microbiol       Date:  2001-06       Impact factor: 3.501

6.  ATP binding to nucleotide binding domain (NBD)1 of the ClpB chaperone induces motion of the long coiled-coil, stabilizes the hexamer, and activates NBD2.

Authors:  Yo-Hei Watanabe; Misa Takano; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2005-04-04       Impact factor: 5.157

7.  Cooperative action of Escherichia coli ClpB protein and DnaK chaperone in the activation of a replication initiation protein.

Authors:  Igor Konieczny; Krzysztof Liberek
Journal:  J Biol Chem       Date:  2002-03-11       Impact factor: 5.157

8.  Amino acid residue 184 of yeast Hsp104 chaperone is critical for prion-curing by guanidine, prion propagation, and thermotolerance.

Authors:  Giman Jung; Gary Jones; Daniel C Masison
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-08       Impact factor: 11.205

9.  Development of polyphosphate parameters for use with the AMBER force field.

Authors:  Kristin L Meagher; Luke T Redman; Heather A Carlson
Journal:  J Comput Chem       Date:  2003-07-15       Impact factor: 3.376

10.  Dissection of septin actin interactions using actin overexpression in Saccharomyces cerevisiae.

Authors:  Caren Norden; Dimitris Liakopoulos; Yves Barral
Journal:  Mol Microbiol       Date:  2004-07       Impact factor: 3.501

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  27 in total

1.  Hsp70 displaces small heat shock proteins from aggregates to initiate protein refolding.

Authors:  Szymon Żwirowski; Agnieszka Kłosowska; Igor Obuchowski; Nadinath B Nillegoda; Artur Piróg; Szymon Ziętkiewicz; Bernd Bukau; Axel Mogk; Krzysztof Liberek
Journal:  EMBO J       Date:  2017-02-20       Impact factor: 11.598

2.  Electrostatic interactions between middle domain motif-1 and the AAA1 module of the bacterial ClpB chaperone are essential for protein disaggregation.

Authors:  Saori Sugita; Kumiko Watanabe; Kana Hashimoto; Tatsuya Niwa; Eri Uemura; Hideki Taguchi; Yo-Hei Watanabe
Journal:  J Biol Chem       Date:  2018-10-16       Impact factor: 5.157

3.  Structural and mechanistic insights into Hsp104 function revealed by synchrotron X-ray footprinting.

Authors:  Elizabeth A Sweeny; Amber Tariq; Esin Gurpinar; Michelle S Go; Matthew A Sochor; Zhong-Yuan Kan; Leland Mayne; S Walter Englander; James Shorter
Journal:  J Biol Chem       Date:  2019-12-27       Impact factor: 5.157

4.  Structural basis for the disaggregase activity and regulation of Hsp104.

Authors:  Alexander Heuck; Sonja Schitter-Sollner; Marcin Józef Suskiewicz; Robert Kurzbauer; Juliane Kley; Alexander Schleiffer; Pascaline Rombaut; Franz Herzog; Tim Clausen
Journal:  Elife       Date:  2016-11-30       Impact factor: 8.140

5.  Potentiated Hsp104 variants antagonize diverse proteotoxic misfolding events.

Authors:  Meredith E Jackrel; Morgan E DeSantis; Bryan A Martinez; Laura M Castellano; Rachel M Stewart; Kim A Caldwell; Guy A Caldwell; James Shorter
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

6.  Structure of Calcarisporiella thermophila Hsp104 Disaggregase that Antagonizes Diverse Proteotoxic Misfolding Events.

Authors:  Karolina Michalska; Kaiming Zhang; Zachary M March; Catherine Hatzos-Skintges; Grigore Pintilie; Lance Bigelow; Laura M Castellano; Leann J Miles; Meredith E Jackrel; Edward Chuang; Robert Jedrzejczak; James Shorter; Wah Chiu; Andrzej Joachimiak
Journal:  Structure       Date:  2018-12-27       Impact factor: 5.006

7.  Head-to-tail interactions of the coiled-coil domains regulate ClpB activity and cooperation with Hsp70 in protein disaggregation.

Authors:  Marta Carroni; Eva Kummer; Yuki Oguchi; Petra Wendler; Daniel K Clare; Irmgard Sinning; Jürgen Kopp; Axel Mogk; Bernd Bukau; Helen R Saibil
Journal:  Elife       Date:  2014-04-30       Impact factor: 8.140

Review 8.  Cooperation of Hsp70 and Hsp100 chaperone machines in protein disaggregation.

Authors:  Axel Mogk; Eva Kummer; Bernd Bukau
Journal:  Front Mol Biosci       Date:  2015-05-19

Review 9.  Metazoan Hsp70-based protein disaggregases: emergence and mechanisms.

Authors:  Nadinath B Nillegoda; Bernd Bukau
Journal:  Front Mol Biosci       Date:  2015-10-09

10.  Regulation of the Hsp104 middle domain activity is critical for yeast prion propagation.

Authors:  Jennifer E Dulle; Kevin C Stein; Heather L True
Journal:  PLoS One       Date:  2014-01-23       Impact factor: 3.240

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