Literature DB >> 23226613

Non-coding RNAs in DNA damage response.

Yunhua Liu1, Xiongbin Lu.   

Abstract

Genome-wide studies have revealed that human and other mammalian genomes are pervasively transcribed and produce thousands of regulatory non-protein-coding RNAs (ncRNAs), including miRNAs, siRNAs, piRNAs and long non-coding RNAs (lncRNAs). Emerging evidences suggest that these ncRNAs also play a pivotal role in genome integrity and stability via the regulation of DNA damage response (DDR). In this review, we discuss the recent finding on the interplay of ncRNAs with the canonical DDR signaling pathway, with a particular emphasis on miRNAs and lncRNAs. While the expression of ncRNAs is regulated in the DDR, the DDR is also subjected to regulation by those DNA damage-responsive ncRNAs. In addition, the roles of those Dicer- and Drosha-dependent small RNAs produced in the vicinity of double-strand breaks sites are also described.

Entities:  

Keywords:  DNA damage response; crosstalk; lncRNAs; miRNAs; ncRNAs

Year:  2012        PMID: 23226613      PMCID: PMC3512188     

Source DB:  PubMed          Journal:  Am J Cancer Res        ISSN: 2156-6976            Impact factor:   6.166


  96 in total

Review 1.  The long arm of long noncoding RNAs: roles as sensors regulating gene transcriptional programs.

Authors:  Xiangting Wang; Xiaoyuan Song; Christopher K Glass; Michael G Rosenfeld
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

2.  The product of the H19 gene may function as an RNA.

Authors:  C I Brannan; E C Dees; R S Ingram; S M Tilghman
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

3.  MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response.

Authors:  Joris Pothof; Nicole S Verkaik; Wilfred van IJcken; Erik A C Wiemer; Van T B Ta; Gijsbertus T J van der Horst; Nicolaas G J Jaspers; Dik C van Gent; Jan H J Hoeijmakers; Stephan P Persengiev
Journal:  EMBO J       Date:  2009-06-18       Impact factor: 11.598

4.  Alteration of miRNA profiles by ionizing radiation in A549 human non-small cell lung cancer cells.

Authors:  Sangsu Shin; Hwa Jun Cha; Eun-Mee Lee; Su-Jae Lee; Sung-Keum Seo; Hyeon-Ok Jin; In-Chul Park; Young-Woo Jin; Sungkwan An
Journal:  Int J Oncol       Date:  2009-07       Impact factor: 5.650

5.  MicroRNA expression after ionizing radiation in human endothelial cells.

Authors:  Mechthild Wagner-Ecker; Christian Schwager; Ute Wirkner; Amir Abdollahi; Peter E Huber
Journal:  Radiat Oncol       Date:  2010-03-26       Impact factor: 3.481

6.  miR-181a and miR-630 regulate cisplatin-induced cancer cell death.

Authors:  Lorenzo Galluzzi; Eugenia Morselli; Ilio Vitale; Oliver Kepp; Laura Senovilla; Alfredo Criollo; Nicolas Servant; Caroline Paccard; Philippe Hupé; Thomas Robert; Hugues Ripoche; Vladimir Lazar; Annick Harel-Bellan; Philippe Dessen; Emmanuel Barillot; Guido Kroemer
Journal:  Cancer Res       Date:  2010-02-09       Impact factor: 12.701

7.  Tsix, a gene antisense to Xist at the X-inactivation centre.

Authors:  J T Lee; L S Davidow; D Warshawsky
Journal:  Nat Genet       Date:  1999-04       Impact factor: 38.330

8.  The ATM kinase induces microRNA biogenesis in the DNA damage response.

Authors:  Xinna Zhang; Guohui Wan; Franklin G Berger; Xiaoming He; Xiongbin Lu
Journal:  Mol Cell       Date:  2011-02-18       Impact factor: 17.970

9.  Modulation of microRNA processing by p53.

Authors:  Hiroshi I Suzuki; Kaoru Yamagata; Koichi Sugimoto; Takashi Iwamoto; Shigeaki Kato; Kohei Miyazono
Journal:  Nature       Date:  2009-07-23       Impact factor: 49.962

10.  A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome.

Authors:  C J Brown; A Ballabio; J L Rupert; R G Lafreniere; M Grompe; R Tonlorenzi; H F Willard
Journal:  Nature       Date:  1991-01-03       Impact factor: 49.962

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  13 in total

1.  BGL3 lncRNA mediates retention of the BRCA1/BARD1 complex at DNA damage sites.

Authors:  Zhaohua Hu; Shaojie Mi; Ting Zhao; Changmin Peng; Yihan Peng; Lulu Chen; Wenge Zhu; Yi Yao; Qibin Song; Xiangpan Li; Xinzhi Li; Chenxi Jia; Huadong Pei
Journal:  EMBO J       Date:  2020-04-29       Impact factor: 11.598

Review 2.  The Role of Non-Coding RNAs and Isothiocyanates in Cancer.

Authors:  Samantha L Martin; Kendra J Royston; Trygve O Tollefsbol
Journal:  Mol Nutr Food Res       Date:  2018-05-28       Impact factor: 5.914

3.  A novel non-coding RNA lncRNA-JADE connects DNA damage signalling to histone H4 acetylation.

Authors:  Guohui Wan; Xiaoxiao Hu; Yunhua Liu; Cecil Han; Anil K Sood; George A Calin; Xinna Zhang; Xiongbin Lu
Journal:  EMBO J       Date:  2013-10-04       Impact factor: 11.598

Review 4.  Non-coding RNAs in DNA damage and repair.

Authors:  Vivek Sharma; Tom Misteli
Journal:  FEBS Lett       Date:  2013-05-16       Impact factor: 4.124

Review 5.  Noncoding RNAs in DNA repair and genome integrity.

Authors:  Guohui Wan; Yunhua Liu; Cecil Han; Xinna Zhang; Xiongbin Lu
Journal:  Antioxid Redox Signal       Date:  2013-09-18       Impact factor: 8.401

Review 6.  Gene regulation of mammalian long non-coding RNA.

Authors:  Heeyoun Bunch
Journal:  Mol Genet Genomics       Date:  2017-09-11       Impact factor: 3.291

Review 7.  MicroRNA expression and its association with DNA repair in preimplantation embryos.

Authors:  Pinar Tulay; Sioban B Sengupta
Journal:  J Reprod Dev       Date:  2016-02-05       Impact factor: 2.214

8.  Time-course differential lncRNA and mRNA expressions in radioresistant hypopharyngeal cancer cells.

Authors:  Jieyu Zhou; Shengda Cao; Wenming Li; Dongmin Wei; Zhentao Wang; Guojun Li; Xinliang Pan; Dapeng Lei
Journal:  Oncotarget       Date:  2017-06-20

9.  The Essential Role of H19 Contributing to Cisplatin Resistance by Regulating Glutathione Metabolism in High-Grade Serous Ovarian Cancer.

Authors:  Zhi-Guo Zheng; Hong Xu; Sha-Sha Suo; Xiao-Li Xu; Mao-Wei Ni; Lin-Hui Gu; Wei Chen; Liang-Yan Wang; Ye Zhao; Bing Tian; Yue-Jin Hua
Journal:  Sci Rep       Date:  2016-05-19       Impact factor: 4.379

10.  Serial interactome capture of the human cell nucleus.

Authors:  Thomas Conrad; Anne-Susann Albrecht; Veronica Rodrigues de Melo Costa; Sascha Sauer; David Meierhofer; Ulf Andersson Ørom
Journal:  Nat Commun       Date:  2016-04-04       Impact factor: 14.919

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