Literature DB >> 23225740

Effect of crowding by Ficolls on OmpA and OmpT refolding and membrane insertion.

Cui Ye1, Qian Chai, Meng Zhong, Yinan Wei.   

Abstract

Folding of outer membrane proteins (OMPs) has been studied extensively in vitro. However, most of these studies have been conducted in dilute buffer solution, which is different from the crowded environment in the cell periplasm, where the folding and membrane insertion of OMPs actually occur. Using OmpA and OmpT as model proteins and Ficoll 70 as the crowding agent, here we investigated the effect of the macromolecular crowding condition on OMP membrane insertion. We found that the presence of Ficoll 70 significantly slowed down the rate of membrane insertion of OmpA while had little effect on those of OmpT. To investigate if the soluble domain of OmpA slowed down membrane insertion in the presence of the crowding agent, we created a truncated OmpA construct that contains only the transmembrane domain (OmpA171). In the absence of crowding agent, OmpA171 refolded at a similar rate as OmpA, although with decreased efficiency. However, under the crowding condition, OmpA171 refolded significantly faster than OmpA. Our results suggest that the periplasmic domain slows down the rate, while improves the efficiency, of OmpA folding and membrane insertion under the crowding condition. Such an effect was not obvious when refolding was studied in buffer solution in the absence of crowding.
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 23225740      PMCID: PMC3588920          DOI: 10.1002/pro.2205

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  40 in total

1.  Macromolecular crowding.

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Authors:  Tomasz Cierpicki; Binyong Liang; Lukas K Tamm; John H Bushweller
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Review 3.  Folding kinetics of the outer membrane proteins OmpA and FomA into phospholipid bilayers.

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Journal:  Chem Phys Lipids       Date:  2006-03-20       Impact factor: 3.329

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Journal:  J Am Chem Soc       Date:  2007-01-31       Impact factor: 15.419

5.  Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder.

Authors:  Brian C McNulty; Gregory B Young; Gary J Pielak
Journal:  J Mol Biol       Date:  2005-12-01       Impact factor: 5.469

Review 6.  Macromolecular crowding: biochemical, biophysical, and physiological consequences.

Authors:  S B Zimmerman; A P Minton
Journal:  Annu Rev Biophys Biomol Struct       Date:  1993

7.  Electrostatic couplings in OmpA ion-channel gating suggest a mechanism for pore opening.

Authors:  Heedeok Hong; Gabor Szabo; Lukas K Tamm
Journal:  Nat Chem Biol       Date:  2006-10-15       Impact factor: 15.040

Review 8.  Advances in understanding bacterial outer-membrane biogenesis.

Authors:  Natividad Ruiz; Daniel Kahne; Thomas J Silhavy
Journal:  Nat Rev Microbiol       Date:  2006-01       Impact factor: 60.633

9.  Macromolecular crowding increases binding of DNA polymerase to DNA: an adaptive effect.

Authors:  S B Zimmerman; B Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

10.  Role of aromatic side chains in the folding and thermodynamic stability of integral membrane proteins.

Authors:  Heedeok Hong; Sangho Park; Ricardo H Flores Jiménez; Dennis Rinehart; Lukas K Tamm
Journal:  J Am Chem Soc       Date:  2007-06-12       Impact factor: 15.419

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  4 in total

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Authors:  Emily J Danoff; Karen G Fleming
Journal:  Biochemistry       Date:  2016-12-21       Impact factor: 3.162

Review 3.  What macromolecular crowding can do to a protein.

Authors:  Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2014-12-12       Impact factor: 5.923

4.  A Fatal Case of Necrotizing Fasciitis Caused by a Highly Virulent Escherichia coli Strain.

Authors:  Sadjia Bekal; André Vincent; Alex Lin; Josée Harel; Jean-Charles Côté; Cécile Tremblay
Journal:  Can J Infect Dis Med Microbiol       Date:  2016-05-31       Impact factor: 2.471

  4 in total

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