Literature DB >> 23225612

Immunohistochemistry, histopathology and infrared spectral histopathology of colon cancer tissue sections.

Angela Kallenbach-Thieltges1, Frederik Großerüschkamp, Axel Mosig, Max Diem, Andrea Tannapfel, Klaus Gerwert.   

Abstract

During the past years, many studies have shown that infrared spectral histopathology (SHP) can distinguish different tissue types and disease types independently of morphological criteria. In this manuscript, we report a comparison of immunohistochemical (IHC), histopathological and spectral histopathological results for colon cancer tissue sections. A supervised algorithm, based on the "random forest" methodology, was trained using classical histopathology, and used to automatically identify colon tissue types, and areas of colon adenocarcinoma. The SHP images subsequently were compared to IHC-based images. This comparison revealed excellent agreement between the methods, and demonstrated that label-free SHP detects compositional changes in tissue that are the basis of the sensitivity of IHC.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Mesh:

Year:  2012        PMID: 23225612     DOI: 10.1002/jbio.201200132

Source DB:  PubMed          Journal:  J Biophotonics        ISSN: 1864-063X            Impact factor:   3.207


  21 in total

1.  Automated identification of subcellular organelles by coherent anti-stokes Raman scattering.

Authors:  Samir F El-Mashtoly; Daniel Niedieker; Dennis Petersen; Sascha D Krauss; Erik Freier; Abdelouahid Maghnouj; Axel Mosig; Stephan Hahn; Carsten Kötting; Klaus Gerwert
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

2.  Classification and prediction of HCC tissues by Raman imaging with identification of fatty acids as potential lipid biomarkers.

Authors:  T Tolstik; C Marquardt; C Beleites; C Matthäus; C Bielecki; M Bürger; C Krafft; O Dirsch; U Settmacher; J Popp; A Stallmach
Journal:  J Cancer Res Clin Oncol       Date:  2014-09-20       Impact factor: 4.553

Review 3.  Advances in Digital Pathology: From Artificial Intelligence to Label-Free Imaging.

Authors:  Frederik Großerueschkamp; Hendrik Jütte; Klaus Gerwert; Andrea Tannapfel
Journal:  Visc Med       Date:  2021-08-24

Review 4.  Emerging Themes in Image Informatics and Molecular Analysis for Digital Pathology.

Authors:  Rohit Bhargava; Anant Madabhushi
Journal:  Annu Rev Biomed Eng       Date:  2016-07-11       Impact factor: 9.590

5.  Vibrational mapping of sinonasal lesions by Fourier transform infrared imaging spectroscopy.

Authors:  Elisabetta Giorgini; Simona Sabbatini; Carla Conti; Corrado Rubini; Romina Rocchetti; Massimo Re; Lisa Vaccari; Elisa Mitri; Vito Librando
Journal:  J Biomed Opt       Date:  2015       Impact factor: 3.170

6.  Real-time interactive data mining for chemical imaging information: application to automated histopathology.

Authors:  David Mayerich; Michael Walsh; Matthew Schulmerich; Rohit Bhargava
Journal:  BMC Bioinformatics       Date:  2013-05-08       Impact factor: 3.169

7.  Colon Cancer Grading Using Infrared Spectroscopic Imaging-Based Deep Learning.

Authors:  Saumya Tiwari; Kianoush Falahkheirkhah; Georgina Cheng; Rohit Bhargava
Journal:  Appl Spectrosc       Date:  2022-03-25       Impact factor: 3.588

8.  Similarity maps and hierarchical clustering for annotating FT-IR spectral images.

Authors:  Qiaoyong Zhong; Chen Yang; Frederik Großerüschkamp; Angela Kallenbach-Thieltges; Peter Serocka; Klaus Gerwert; Axel Mosig
Journal:  BMC Bioinformatics       Date:  2013-11-20       Impact factor: 3.169

9.  Resolving Interobserver Discrepancies in Lung Cancer Diagnoses by Spectral Histopathology.

Authors:  Ali Akalin; Ayşegül Ergin; Stanley Remiszewski; Xinying Mu; Dan Raz; Max Diem
Journal:  Arch Pathol Lab Med       Date:  2018-08-24       Impact factor: 5.534

10.  Using Fourier transform IR spectroscopy to analyze biological materials.

Authors:  Matthew J Baker; Júlio Trevisan; Paul Bassan; Rohit Bhargava; Holly J Butler; Konrad M Dorling; Peter R Fielden; Simon W Fogarty; Nigel J Fullwood; Kelly A Heys; Caryn Hughes; Peter Lasch; Pierre L Martin-Hirsch; Blessing Obinaju; Ganesh D Sockalingum; Josep Sulé-Suso; Rebecca J Strong; Michael J Walsh; Bayden R Wood; Peter Gardner; Francis L Martin
Journal:  Nat Protoc       Date:  2014-07-03       Impact factor: 13.491

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