Literature DB >> 23221876

Mutation accumulation and fitness in mutator subpopulations of Escherichia coli.

Ram P Maharjan1, Bin Liu, Yang Li, Peter R Reeves, Lei Wang, Thomas Ferenci.   

Abstract

Bacterial populations in clinical and laboratory settings contain a significant proportion of mutants with elevated mutation rates (mutators). Mutators have a particular advantage when multiple beneficial mutations are needed for fitness, as in antibiotic resistance. Nevertheless, high mutation rates potentially lead to increasing numbers of deleterious mutations and subsequently to the decreased fitness of mutators. To test how fitness changed with mutation accumulation, genome sequencing and fitness assays of nine Escherichia coli mutY mutators were undertaken in an evolving chemostat population at three time points. Unexpectedly, the fitness in members of the mutator subpopulation became constant despite a growing number of mutations over time. To test if the accumulated mutations affected fitness, we replaced each of the known beneficial mutations with wild-type alleles in a mutator isolate. We found that the other 25 accumulated mutations were not deleterious. Our results suggest that isolates with deleterious mutations are eliminated by competition in a continuous culture, leaving mutators with mostly neutral mutations. Interestingly, the mutator-non-mutator balance in the population reversed after the fitness plateau of mutators was reached, suggesting that the mutator-non-mutator ratio in populations has more to do with competition between members of the population than the accumulation of deleterious mutations.

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Year:  2012        PMID: 23221876      PMCID: PMC3565518          DOI: 10.1098/rsbl.2012.0961

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.703


  22 in total

1.  The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coli.

Authors:  L Notley-McRobb; T Ferenci
Journal:  Environ Microbiol       Date:  1999-02       Impact factor: 5.491

Review 2.  The rise and fall of mutator bacteria.

Authors:  A Giraud; M Radman; I Matic; F Taddei
Journal:  Curr Opin Microbiol       Date:  2001-10       Impact factor: 7.934

3.  Enrichment and elimination of mutY mutators in Escherichia coli populations.

Authors:  Lucinda Notley-McRobb; Shona Seeto; Thomas Ferenci
Journal:  Genetics       Date:  2002-11       Impact factor: 4.562

4.  Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations.

Authors:  Aaron C Shaver; Peter G Dombrowski; Joseph Y Sweeney; Tania Treis; Renata M Zappala; Paul D Sniegowski
Journal:  Genetics       Date:  2002-10       Impact factor: 4.562

Review 5.  The Ka/Ks ratio: diagnosing the form of sequence evolution.

Authors:  Laurence D Hurst
Journal:  Trends Genet       Date:  2002-09       Impact factor: 11.639

6.  Spontaneous mutators in bacteria: insights into pathways of mutagenesis and repair.

Authors:  J H Miller
Journal:  Annu Rev Microbiol       Date:  1996       Impact factor: 15.500

7.  Adaptive mgl-regulatory mutations and genetic diversity evolving in glucose-limited Escherichia coli populations.

Authors:  L Notley-McRobb; T Ferenci
Journal:  Environ Microbiol       Date:  1999-02       Impact factor: 5.491

8.  High mutation frequencies among Escherichia coli and Salmonella pathogens.

Authors:  J E LeClerc; B Li; W L Payne; T A Cebula
Journal:  Science       Date:  1996-11-15       Impact factor: 47.728

9.  High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection.

Authors:  A Oliver; R Cantón; P Campo; F Baquero; J Blázquez
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

10.  The multiplicity of divergence mechanisms in a single evolving population.

Authors:  Ram P Maharjan; Thomas Ferenci; Peter R Reeves; Yang Li; Bin Liu; Lei Wang
Journal:  Genome Biol       Date:  2012-06-08       Impact factor: 13.583

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  8 in total

1.  Deleterious passengers in adapting populations.

Authors:  Benjamin H Good; Michael M Desai
Journal:  Genetics       Date:  2014-09-05       Impact factor: 4.562

Review 2.  Experimental evolution and the dynamics of genomic mutation rate modifiers.

Authors:  Y Raynes; P D Sniegowski
Journal:  Heredity (Edinb)       Date:  2014-05-21       Impact factor: 3.821

3.  Adaptation to simulated microgravity in Streptococcus mutans.

Authors:  Mizpha C Fernander; Paris K Parsons; Billal Khaled; Amina Bradley; Joseph L Graves; Misty D Thomas
Journal:  NPJ Microgravity       Date:  2022-06-02       Impact factor: 4.970

4.  The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps.

Authors:  João Barroso-Batista; Ana Sousa; Marta Lourenço; Marie-Louise Bergman; Daniel Sobral; Jocelyne Demengeot; Karina B Xavier; Isabel Gordo
Journal:  PLoS Genet       Date:  2014-03-06       Impact factor: 5.917

5.  Normal mutation rate variants arise in a Mutator (Mut S) Escherichia coli population.

Authors:  María-Carmen Turrientes; Fernando Baquero; Bruce R Levin; José-Luis Martínez; Aida Ripoll; José-María González-Alba; Raquel Tobes; Marina Manrique; Maria-Rosario Baquero; Mario-José Rodríguez-Domínguez; Rafael Cantón; Juan-Carlos Galán
Journal:  PLoS One       Date:  2013-09-12       Impact factor: 3.240

6.  Ex uno plures: clonal reinforcement drives evolution of a simple microbial community.

Authors:  Margie Kinnersley; Jared Wenger; Evgueny Kroll; Julian Adams; Gavin Sherlock; Frank Rosenzweig
Journal:  PLoS Genet       Date:  2014-06-26       Impact factor: 5.917

7.  Coordinated Changes in Mutation and Growth Rates Induced by Genome Reduction.

Authors:  Issei Nishimura; Masaomi Kurokawa; Liu Liu; Bei-Wen Ying
Journal:  MBio       Date:  2017-07-05       Impact factor: 7.867

8.  Genomewide Mutational Diversity in Escherichia coli Population Evolving in Prolonged Stationary Phase.

Authors:  Savita Chib; Farhan Ali; Aswin Sai Narain Seshasayee
Journal:  mSphere       Date:  2017-05-24       Impact factor: 4.389

  8 in total

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