Literature DB >> 23219555

Human diseases through the lens of network biology.

Laura I Furlong1.   

Abstract

One of the challenges raised by next generation sequencing (NGS) is the identification of clinically relevant mutations among all the genetic variation found in an individual. Network biology has emerged as an integrative and systems-level approach for the interpretation of genome data in the context of health and disease. Network biology can provide insightful models for genetic phenomena such as penetrance, epistasis, and modes of inheritance, all of which are integral aspects of Mendelian and complex diseases. Moreover, it can shed light on disease mechanisms via the identification of modules perturbed in those diseases. Current challenges include understanding disease as a result of the interplay between environmental and genetic perturbations and assessing the impact of personal sequence variations in the context of networks. Full realization of the potential of personal genomics will benefit from network biology approaches that aim to uncover the mechanisms underlying disease pathogenesis, identify new biomarkers, and guide personalized therapeutic interventions.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23219555     DOI: 10.1016/j.tig.2012.11.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  95 in total

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2.  Evolving Schema for Employing Network Biology Approaches to Understand Pulmonary Hypertension.

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3.  A scalable method for molecular network reconstruction identifies properties of targets and mutations in acute myeloid leukemia.

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Review 4.  Biomechanisms of Comorbidity: Reviewing Integrative Analyses of Multi-omics Datasets and Electronic Health Records.

Authors:  N Pouladi; I Achour; H Li; J Berghout; C Kenost; M L Gonzalez-Garay; Y A Lussier
Journal:  Yearb Med Inform       Date:  2016-11-10

5.  Network biology in medicine and beyond.

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Review 6.  An Expanded View of Complex Traits: From Polygenic to Omnigenic.

Authors:  Evan A Boyle; Yang I Li; Jonathan K Pritchard
Journal:  Cell       Date:  2017-06-15       Impact factor: 41.582

7.  Large-scale analysis of disease pathways in the human interactome.

Authors:  Monica Agrawal; Marinka Zitnik; Jure Leskovec
Journal:  Pac Symp Biocomput       Date:  2018

Review 8.  Edgotype: a fundamental link between genotype and phenotype.

Authors:  Nidhi Sahni; Song Yi; Quan Zhong; Noor Jailkhani; Benoit Charloteaux; Michael E Cusick; Marc Vidal
Journal:  Curr Opin Genet Dev       Date:  2013-11-26       Impact factor: 5.578

9.  DNA methylation in lung cells is associated with asthma endotypes and genetic risk.

Authors:  Jessie Nicodemus-Johnson; Rachel A Myers; Noburu J Sakabe; Debora R Sobreira; Douglas K Hogarth; Edward T Naureckas; Anne I Sperling; Julian Solway; Steven R White; Marcelo A Nobrega; Dan L Nicolae; Yoav Gilad; Carole Ober
Journal:  JCI Insight       Date:  2016-12-08

Review 10.  Genotype to phenotype via network analysis.

Authors:  Hannah Carter; Matan Hofree; Trey Ideker
Journal:  Curr Opin Genet Dev       Date:  2013-11-14       Impact factor: 5.578

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