Literature DB >> 23214542

Multiscale community geometry in a network and its application.

Chen Chen1, Hsieh Fushing.   

Abstract

We introduce a between-ness-based distance metric to extract local and global information for each pair of nodes (or "vertices" used interchangeably) located in a binary network. Since this distance then superimposes a weighted graph upon such a binary network, a multiscale clustering mechanism, called data cloud geometry, is applicable to discover hierarchical communities within a binary network. This approach resolves many shortcomings of community finding approaches, which are primarily based on modularity optimization. Using several contrived and real binary networks, our community hierarchies compare favorably with results derived from a recently proposed approach based on time-scale differences of random walks and has already demonstrated significant improvements over module-based approaches, especially on the multiscale and the determination of the number of communities.

Mesh:

Year:  2012        PMID: 23214542     DOI: 10.1103/PhysRevE.86.041120

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

Review 1.  Acoustic sequences in non-human animals: a tutorial review and prospectus.

Authors:  Arik Kershenbaum; Daniel T Blumstein; Marie A Roch; Çağlar Akçay; Gregory Backus; Mark A Bee; Kirsten Bohn; Yan Cao; Gerald Carter; Cristiane Cäsar; Michael Coen; Stacy L DeRuiter; Laurance Doyle; Shimon Edelman; Ramon Ferrer-i-Cancho; Todd M Freeberg; Ellen C Garland; Morgan Gustison; Heidi E Harley; Chloé Huetz; Melissa Hughes; Julia Hyland Bruno; Amiyaal Ilany; Dezhe Z Jin; Michael Johnson; Chenghui Ju; Jeremy Karnowski; Bernard Lohr; Marta B Manser; Brenda McCowan; Eduardo Mercado; Peter M Narins; Alex Piel; Megan Rice; Roberta Salmi; Kazutoshi Sasahara; Laela Sayigh; Yu Shiu; Charles Taylor; Edgar E Vallejo; Sara Waller; Veronica Zamora-Gutierrez
Journal:  Biol Rev Camb Philos Soc       Date:  2014-11-26

Review 2.  Social management of laboratory rhesus macaques housed in large groups using a network approach: A review.

Authors:  Brenda McCowan; Brianne Beisner; Darcy Hannibal
Journal:  Behav Processes       Date:  2017-12-07       Impact factor: 1.777

3.  Bootstrapping on undirected binary networks via statistical mechanics.

Authors:  Hsieh Fushing; Chen Chen; Shan-Yu Liu; Patrice Koehl
Journal:  J Stat Phys       Date:  2014-09-01       Impact factor: 1.548

4.  biDCG: a new method for discovering global features of DNA microarray data via an iterative re-clustering procedure.

Authors:  Chia-Pei Chen; Hsieh Fushing; Rob Atwill; Patrice Koehl
Journal:  PLoS One       Date:  2014-07-21       Impact factor: 3.240

5.  Multi-scale clustering by building a robust and self correcting ultrametric topology on data points.

Authors:  Hsieh Fushing; Hui Wang; Kimberly Vanderwaal; Brenda McCowan; Patrice Koehl
Journal:  PLoS One       Date:  2013-02-12       Impact factor: 3.240

6.  Connections Matter: Social Networks and Lifespan Health in Primate Translational Models.

Authors:  Brenda McCowan; Brianne Beisner; Eliza Bliss-Moreau; Jessica Vandeleest; Jian Jin; Darcy Hannibal; Fushing Hsieh
Journal:  Front Psychol       Date:  2016-04-22

7.  Integrative Inferences on Pattern Geometries of Grapes Grown under Water Stress and Their Resulting Wines.

Authors:  Fushing Hsieh; Chih-Hsin Hsueh; Constantin Heitkamp; Mark Matthews
Journal:  PLoS One       Date:  2016-08-10       Impact factor: 3.240

  7 in total

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