Literature DB >> 23210463

Simulations of the two-dimensional electronic spectroscopy of the photosystem II reaction center.

K L M Lewis1, F D Fuller, J A Myers, C F Yocum, S Mukamel, D Abramavicius, J P Ogilvie.   

Abstract

We report simulations of the two-dimensional electronic spectroscopy of the Q(y) band of the D1-D2-Cyt b559 photosystem II reaction center at 77 K. We base the simulations on an existing Hamiltonian that was derived by simultaneous fitting to a wide range of linear spectroscopic measurements and described within modified Redfield theory. The model obtains reasonable agreement with most aspects of the two-dimensional spectra, including the overall peak shapes and excited state absorption features. It does not reproduce the rapid equilibration from high energy to low energy excitonic states evident by a strong cross-peak below the diagonal. We explore modifications to the model to incorporate new structural data and improve agreement with the two-dimensional spectra. We find that strengthening the system-bath coupling and lowering the degree of disorder significantly improves agreement with the cross-peak feature, while lessening agreement with the relative diagonal/antidiagonal width of the 2D spectra. We conclude that two-dimensional electronic spectroscopy provides a sensitive test of excitonic models of the photosystem II reaction center and discuss avenues for further refinement of such models.

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Year:  2012        PMID: 23210463      PMCID: PMC3702820          DOI: 10.1021/jp3081707

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  34 in total

1.  Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.

Authors:  Nobuo Kamiya; Jian-Ren Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

2.  Subpicosecond equilibration of excitation energy in isolated photosystem II reaction centers.

Authors:  J R Durrant; G Hastings; D M Joseph; J Barber; G Porter; D R Klug
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

3.  Observation of pheophytin reduction in photosystem two reaction centers using femtosecond transient absorption spectroscopy.

Authors:  G Hastings; J R Durrant; J Barber; G Porter; D R Klug
Journal:  Biochemistry       Date:  1992-08-25       Impact factor: 3.162

4.  Primary charge separation in Photosystem II.

Authors:  J P Dekker; R Van Grondelle
Journal:  Photosynth Res       Date:  2000       Impact factor: 3.573

5.  Initial electron donor and acceptor in isolated Photosystem II reaction centers identified with femtosecond mid-IR spectroscopy.

Authors:  Marie Louise Groot; Natalia P Pawlowicz; Luuk J G W van Wilderen; Jacques Breton; Ivo H M van Stokkum; Rienk van Grondelle
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

6.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

7.  Simulation protocols for coherent femtosecond vibrational spectra of peptides.

Authors:  Wei Zhuang; Darius Abramavicius; Tomoyuki Hayashi; Shaul Mukamel
Journal:  J Phys Chem B       Date:  2006-02-23       Impact factor: 2.991

Review 8.  Optical properties, excitation energy and primary charge transfer in photosystem II: theory meets experiment.

Authors:  Thomas Renger; Eberhard Schlodder
Journal:  J Photochem Photobiol B       Date:  2011-04-07       Impact factor: 6.252

9.  Rapid and simple isolation of pure photosystem II core and reaction center particles from spinach.

Authors:  P J van Leeuwen; M C Nieveen; E J van de Meent; J P Dekker; H J van Gorkom
Journal:  Photosynth Res       Date:  1991-06       Impact factor: 3.573

10.  Mixing of exciton and charge-transfer states in Photosystem II reaction centers: modeling of Stark spectra with modified Redfield theory.

Authors:  Vladimir I Novoderezhkin; Jan P Dekker; Rienk van Grondelle
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

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  6 in total

Review 1.  Role of coherent vibrations in energy transfer and conversion in photosynthetic pigment-protein complexes.

Authors:  Darius Abramavicius; Leonas Valkunas
Journal:  Photosynth Res       Date:  2015-01-25       Impact factor: 3.573

2.  Vibronic coherence in oxygenic photosynthesis.

Authors:  Franklin D Fuller; Jie Pan; Andrius Gelzinis; Vytautas Butkus; S Seckin Senlik; Daniel E Wilcox; Charles F Yocum; Leonas Valkunas; Darius Abramavicius; Jennifer P Ogilvie
Journal:  Nat Chem       Date:  2014-07-13       Impact factor: 24.427

3.  Exact simulation of pigment-protein complexes unveils vibronic renormalization of electronic parameters in ultrafast spectroscopy.

Authors:  F Caycedo-Soler; A Mattioni; J Lim; T Renger; S F Huelga; M B Plenio
Journal:  Nat Commun       Date:  2022-05-25       Impact factor: 17.694

4.  Dynamic protein conformations preferentially drive energy transfer along the active chain of the photosystem II reaction centre.

Authors:  Lu Zhang; Daniel-Adriano Silva; Houdao Zhang; Alexander Yue; YiJing Yan; Xuhui Huang
Journal:  Nat Commun       Date:  2014-06-23       Impact factor: 14.919

5.  Primary Charge Separation in the Photosystem II Reaction Center Revealed by a Global Analysis of the Two-dimensional Electronic Spectra.

Authors:  Hong-Guang Duan; Valentyn I Prokhorenko; Emilie Wientjes; Roberta Croce; Michael Thorwart; R J Dwayne Miller
Journal:  Sci Rep       Date:  2017-09-27       Impact factor: 4.379

6.  Quantum Coherence in Photosynthesis for Efficient Solar Energy Conversion.

Authors:  Elisabet Romero; Ramunas Augulis; Vladimir I Novoderezhkin; Marco Ferretti; Jos Thieme; Donatas Zigmantas; Rienk van Grondelle
Journal:  Nat Phys       Date:  2014-09-01       Impact factor: 20.034

  6 in total

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