Literature DB >> 23209222

Genome sequence of Francisella tularensis subspecies holarctica strain FSC200, isolated from a child with tularemia.

Kerstin Svensson1, Andreas Sjödin, Mona Byström, Malin Granberg, Mitchell J Brittnacher, Laurence Rohmer, Michael A Jacobs, Elizabeth H Sims-Day, Ruth Levy, Yang Zhou, Hillary S Hayden, Regina Lim, Jean Chang, Donald Guenthener, Allison Kang, Eric Haugen, Will Gillett, Rajinder Kaul, Mats Forsman, Pär Larsson, Anders Johansson.   

Abstract

Here we report the complete, accurate 1.89-Mb genome sequence of Francisella tularensis subsp. holarctica strain FSC200, isolated in 1998 in the Swedish municipality Ljusdal, which is in an area where tularemia is highly endemic. This genome is important because strain FSC200 has been extensively used for functional and genetic studies of Francisella and is well-characterized.

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Year:  2012        PMID： 23209222      PMCID： PMC3510583          DOI： 10.1128/JB.01040-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  28 in total

1.  Deletion of IglH in virulent Francisella tularensis subsp. holarctica FSC200 strain results in attenuation and provides protection against the challenge with the parental strain.

Authors:  Adela Straskova; Lukas Cerveny; Petra Spidlova; Vera Dankova; Davor Belcic; Marina Santic; Jiri Stulik
Journal:  Microbes Infect       Date:  2011-09-08       Impact factor: 2.700

2.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Resistance of Francisella tularensis strains against reactive nitrogen and oxygen species with special reference to the role of KatG.

Authors:  Helena Lindgren; Hua Shen; Carl Zingmark; Igor Golovliov; Wayne Conlan; Anders Sjöstedt
Journal:  Infect Immun       Date:  2007-01-08       Impact factor: 3.441

5.  Evolution of subspecies of Francisella tularensis.

Authors:  Kerstin Svensson; Pär Larsson; Daniel Johansson; Mona Byström; Mats Forsman; Anders Johansson
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

6.  Ciprofloxacin for treatment of tularemia in children.

Authors:  A Johansson; L Berglund; L Gothefors; A Sjöstedt; A Tärnvik
Journal:  Pediatr Infect Dis J       Date:  2000-05       Impact factor: 2.129

7.  Potential source of Francisella tularensis live vaccine strain attenuation determined by genome comparison.

Authors:  Laurence Rohmer; Mitchell Brittnacher; Kerstin Svensson; Danielle Buckley; Eric Haugen; Yang Zhou; Jean Chang; Ruth Levy; Hillary Hayden; Mats Forsman; Maynard Olson; Anders Johansson; Rajinder Kaul; Samuel I Miller
Journal:  Infect Immun       Date:  2006-09-25       Impact factor: 3.441

8.  Discrimination of human pathogenic subspecies of Francisella tularensis by using restriction fragment length polymorphism.

Authors:  Rebecca Thomas; Anders Johansson; Brendan Neeson; Karen Isherwood; Anders Sjöstedt; Jill Ellis; Richard W Titball
Journal:  J Clin Microbiol       Date:  2003-01       Impact factor: 5.948

9.  Direct repeat-mediated deletion of a type IV pilin gene results in major virulence attenuation of Francisella tularensis.

Authors:  Anna-Lena Forslund; Kerstin Kuoppa; Kerstin Svensson; Emelie Salomonsson; Anders Johansson; Mona Byström; Petra C F Oyston; Stephen L Michell; Richard W Titball; Laila Noppa; Elisabet Frithz-Lindsten; Mats Forsman; Ake Forsberg
Journal:  Mol Microbiol       Date:  2006-03       Impact factor: 3.501

10.  Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.

Authors:  Laurence Rohmer; Christine Fong; Simone Abmayr; Michael Wasnick; Theodore J Larson Freeman; Matthew Radey; Tina Guina; Kerstin Svensson; Hillary S Hayden; Michael Jacobs; Larry A Gallagher; Colin Manoil; Robert K Ernst; Becky Drees; Danielle Buckley; Eric Haugen; Donald Bovee; Yang Zhou; Jean Chang; Ruth Levy; Regina Lim; Will Gillett; Don Guenthener; Allison Kang; Scott A Shaffer; Greg Taylor; Jinzhi Chen; Byron Gallis; David A D'Argenio; Mats Forsman; Maynard V Olson; David R Goodlett; Rajinder Kaul; Samuel I Miller; Mitchell J Brittnacher
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583
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  17 in total

1.  Whole-Genome Relationships among Francisella Bacteria of Diverse Origins Define New Species and Provide Specific Regions for Detection.

Authors:  Jean F Challacombe; Jeannine M Petersen; La Verne Gallegos-Graves; David Hodge; Segaran Pillai; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2017-01-17       Impact factor: 4.792

2.  Natural Selection in Virulence Genes of Francisella tularensis.

Authors:  Mark K Gunnell; Richard A Robison; Byron J Adams
Journal:  J Mol Evol       Date:  2016-05-13       Impact factor: 2.395

3.  Draft genome sequence of Francisella tularensis subsp. holarctica BD11-00177.

Authors:  Jordy P M Coolen; Andreas Sjödin; Boulos Maraha; Gerard F Hajer; Mats Forsman; Ellen Verspui; Hendrina M E Frenay; Daan W Notermans; Maaike C de Vries; Frans A G Reubsaet; Armand Paauw; Guus Roeselers
Journal:  Stand Genomic Sci       Date:  2013-08-10

4.  Francisella tularensis subspecies holarctica occurs in Swedish mosquitoes, persists through the developmental stages of laboratory-infected mosquitoes and is transmissible during blood feeding.

Authors:  J Thelaus; A Andersson; T Broman; S Bäckman; M Granberg; L Karlsson; K Kuoppa; E Larsson; E Lundmark; J O Lundström; P Mathisen; J Näslund; M Schäfer; T Wahab; M Forsman
Journal:  Microb Ecol       Date:  2013-09-21       Impact factor: 4.552

5.  Transmission of tularemia from a water source by transstadial maintenance in a mosquito vector.

Authors:  Stina Bäckman; Jonas Näslund; Mats Forsman; Johanna Thelaus
Journal:  Sci Rep       Date:  2015-01-22       Impact factor: 4.379

6.  Long-range dispersal moved Francisella tularensis into Western Europe from the East.

Authors:  Chinmay Dwibedi; Dawn Birdsell; Adrian Lärkeryd; Kerstin Myrtennäs; Caroline Öhrman; Elin Nilsson; Edvin Karlsson; Christian Hochhalter; Andrew Rivera; Sara Maltinsky; Brittany Bayer; Paul Keim; Holger C Scholz; Herbert Tomaso; Matthias Wittwer; Christian Beuret; Nadia Schuerch; Paola Pilo; Marta Hernández Pérez; David Rodriguez-Lazaro; Raquel Escudero; Pedro Anda; Mats Forsman; David M Wagner; Pär Larsson; Anders Johansson
Journal:  Microb Genom       Date:  2016-12-12

7.  Revisiting Francisella tularensis subsp. holarctica, Causative Agent of Tularemia in Germany With Bioinformatics: New Insights in Genome Structure, DNA Methylation and Comparative Phylogenetic Analysis.

Authors:  Anne Busch; Prasad Thomas; Eric Zuchantke; Holger Brendebach; Kerstin Neubert; Josephine Gruetzke; Sascha Al Dahouk; Martin Peters; Helmut Hotzel; Heinrich Neubauer; Herbert Tomaso
Journal:  Front Microbiol       Date:  2018-03-13       Impact factor: 5.640

8.  Galleria mellonella Reveals Niche Differences Between Highly Pathogenic and Closely Related Strains of Francisella spp.

Authors:  Johanna Thelaus; Eva Lundmark; Petter Lindgren; Andreas Sjödin; Mats Forsman
Journal:  Front Cell Infect Microbiol       Date:  2018-06-05       Impact factor: 5.293

Review 9.  Comparative review of Francisella tularensis and Francisella novicida.

Authors:  Luke C Kingry; Jeannine M Petersen
Journal:  Front Cell Infect Microbiol       Date:  2014-03-13       Impact factor: 5.293

10.  Mitochondrial ROS potentiates indirect activation of the AIM2 inflammasome.

Authors:  Deborah D Crane; Timothy J Bauler; Tara D Wehrly; Catharine M Bosio
Journal:  Front Microbiol       Date:  2014-08-20       Impact factor: 5.640
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