Literature DB >> 23209205

Genome sequence of Coxiella burnetii 109, a doxycycline-resistant clinical isolate.

Laetitia Rouli1, Jean-Marc Rolain, Adil El Filali, Catherine Robert, Didier Raoult.   

Abstract

Coxiella burnetii 109, with a 2.03-Mb genome, is a doxycycline-resistant human isolate that was isolated from the cardiac valve of a German male patient with Q fever endocarditis who died during the course of the treatment due to the bacterium's resistance to doxycycline. This new genome can be useful for future comparative genomic or Q fever studies.

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Year:  2012        PMID： 23209205      PMCID： PMC3510555          DOI： 10.1128/JB.01856-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Complete genome sequence of the Q-fever pathogen Coxiella burnetii.

Authors:  Rekha Seshadri; Ian T Paulsen; Jonathan A Eisen; Timothy D Read; Karen E Nelson; William C Nelson; Naomi L Ward; Hervé Tettelin; Tanja M Davidsen; Maureen J Beanan; Robert T Deboy; Sean C Daugherty; Lauren M Brinkac; Ramana Madupu; Robert J Dodson; Hoda M Khouri; Kathy H Lee; Heather A Carty; David Scanlan; Robert A Heinzen; Herbert A Thompson; James E Samuel; Claire M Fraser; John F Heidelberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

2.  Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella.

Authors:  Paul A Beare; Nathan Unsworth; Masako Andoh; Daniel E Voth; Anders Omsland; Stacey D Gilk; Kelly P Williams; Bruno W Sobral; John J Kupko; Stephen F Porcella; James E Samuel; Robert A Heinzen
Journal:  Infect Immun       Date:  2008-12-01       Impact factor: 3.441

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Correlation between ratio of serum doxycycline concentration to MIC and rapid decline of antibody levels during treatment of Q fever endocarditis.

Authors:  Jean-Marc Rolain; Areen Boulos; Marie-Noëlle Mallet; Didier Raoult
Journal:  Antimicrob Agents Chemother       Date:  2005-07       Impact factor: 5.191

Review 5.  Q fever.

Authors:  M Maurin; D Raoult
Journal:  Clin Microbiol Rev       Date:  1999-10       Impact factor: 26.132

6.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

7.  Mutational analysis of cis-acting sequences and gene function in RNA3 of cucumber mosaic virus.

Authors:  F Boccard; D Baulcombe
Journal:  Virology       Date:  1993-04       Impact factor: 3.616

8.  Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource.

Authors:  Shulei Sun; Jing Chen; Weizhong Li; Ilkay Altintas; Abel Lin; Steve Peltier; Karen Stocks; Eric E Allen; Mark Ellisman; Jeffrey Grethe; John Wooley
Journal:  Nucleic Acids Res       Date:  2010-11-02       Impact factor: 16.971

9.  Genomotyping of Coxiella burnetii using microarrays reveals a conserved genomotype for hard tick isolates.

Authors:  Quentin Leroy; Fabrice Armougom; Pascal Barbry; Didier Raoult
Journal:  PLoS One       Date:  2011-10-25       Impact factor: 3.240

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  10 in total
  17 in total

Review 1.  From Q Fever to Coxiella burnetii Infection: a Paradigm Change.

Authors:  Carole Eldin; Cléa Mélenotte; Oleg Mediannikov; Eric Ghigo; Matthieu Million; Sophie Edouard; Jean-Louis Mege; Max Maurin; Didier Raoult
Journal:  Clin Microbiol Rev       Date:  2017-01       Impact factor: 26.132

Review 2.  Coxiella burnetii: international pathogen of mystery.

Authors:  Amanda L Dragan; Daniel E Voth
Journal:  Microbes Infect       Date:  2019-09-28       Impact factor: 2.700

Review 3.  Antimicrobial therapies for Q fever.

Authors:  Gilbert J Kersh
Journal:  Expert Rev Anti Infect Ther       Date:  2013-09-27       Impact factor: 5.091

4.  High-Content Screening, a Reliable System for Coxiella burnetii Isolation from Clinical Samples.

Authors:  Rania Francis; Maxime Mioulane; Marion Le Bideau; Marie-Charlotte Mati; Pierre-Edouard Fournier; Didier Raoult; Jacques Yaacoub Bou Khalil; Bernard La Scola
Journal:  J Clin Microbiol       Date:  2020-04-23       Impact factor: 5.948

5.  Efficacy of liposome-encapsulated ciprofloxacin in a murine model of Q fever.

Authors:  I H Norville; G J Hatch; K R Bewley; D J Atkinson; K A Hamblin; J D Blanchard; S J Armstrong; J K Pitman; E Rayner; G Hall; J Vipond; T P Atkins
Journal:  Antimicrob Agents Chemother       Date:  2014-07-07       Impact factor: 5.191

6.  First Draft Genome Sequence of a Human Coxiella burnetii Isolate, Originating from the Largest Q Fever Outbreak Ever Reported, the Netherlands, 2007 to 2010.

Authors:  J A Hammerl; K Mertens; L D Sprague; V H Hackert; J Buijs; C J Hoebe; K Henning; H Neubauer; S Al Dahouk
Journal:  Genome Announc       Date:  2015-05-07

7.  Hidden Selection of Bacterial Resistance to Fluoroquinolones In Vivo: The Case of Legionella pneumophila and Humans.

Authors:  Lubana Shadoud; Iyad Almahmoud; Sophie Jarraud; Jérôme Etienne; Sylvie Larrat; Carole Schwebel; Jean-François Timsit; Dominique Schneider; Max Maurin
Journal:  EBioMedicine       Date:  2015-07-17       Impact factor: 8.143

8.  Eight new genomes and synthetic controls increase the accessibility of rapid melt-MAMA SNP typing of Coxiella burnetii.

Authors:  Edvin Karlsson; Anna Macellaro; Mona Byström; Mats Forsman; Dimitrios Frangoulidis; Ingmar Janse; Pär Larsson; Petter Lindgren; Caroline Ohrman; Bart van Rotterdam; Andreas Sjödin; Kerstin Myrtennäs
Journal:  PLoS One       Date:  2014-01-21       Impact factor: 3.240

9.  Draft Genome Sequences of Six Ruminant Coxiella burnetii Isolates of European Origin.

Authors:  Karim Sidi-Boumedine; Richard J Ellis; Gilbert Adam; Myriam Prigent; Oystein Angen; Anna Aspán; Richard Thiéry; Elodie Rousset
Journal:  Genome Announc       Date:  2014-05-15

Review 10.  Development of Liposomal Ciprofloxacin to Treat Lung Infections.

Authors:  David Cipolla; Jim Blanchard; Igor Gonda
Journal:  Pharmaceutics       Date:  2016-03-01       Impact factor: 6.321
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