Literature DB >> 23208875

Evaluation of loop-mediated isothermal amplification suitable for molecular monitoring of schistosome-infected snails in field laboratories.

Joseph Hamburger1, Ibrahim Abbasi, Curtis Kariuki, Atsabina Wanjala, Elton Mzungu, Peter Mungai, Eric Muchiri, Charles H King.   

Abstract

We previously described loop-mediated isothermal amplification (LAMP) for detection of Schistosoma haematobium and S. mansoni DNA in infected snails. In the present study, we adapted the LAMP assay for application in field laboratories in schistosomiasis-endemic areas. Isolation of DNA was simplified by blotting snail tissue (extracted in NaOH/sodium dodecyl sulfate) onto treated membranes, which enabled preservation at ambient temperatures. A ready-mix of LAMP reagents, suitable for shipment at ambient temperature and storage in minimal refrigeration, was used. Local survey teams without experience in molecular biology acquired operational expertise with this test within a few hours. Fifty-four field-caught snails were tested locally by LAMP and 59 were tested at similar conditions in Jerusalem. The LAMP results were consistent with those of a polymerase chain reaction; only four samples showed false-negative results. Results indicate that LAMP assays are suitable for detection of S. haematobium and S. mansoni in low-technology parasitology laboratories in which schistosomiasis elimination activities are undertaken.

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Year:  2012        PMID: 23208875      PMCID: PMC3583328          DOI: 10.4269/ajtmh.2012.12-0208

Source DB:  PubMed          Journal:  Am J Trop Med Hyg        ISSN: 0002-9637            Impact factor:   2.345


  16 in total

1.  Detection and quantification of schistosome DNA in freshwater snails using either fluorescent probes in real-time PCR or oligochromatographic dipstick assays targeting the ribosomal intergenic spacer.

Authors:  Richard A Kane; J Russell Stothard; David Rollinson; Thierry Leclipteux; Jonathan Evraerts; Claire J Standley; Fiona Allan; Martha Betson; Rehana Kaba; Pascal Mertens; Thierry Laurent
Journal:  Acta Trop       Date:  2011-11-11       Impact factor: 3.112

Review 2.  Transmission control for schistosomiasis - why it matters now.

Authors:  Charles H King; Robert F Sturrock; H Curtis Kariuki; Joseph Hamburger
Journal:  Trends Parasitol       Date:  2006-10-09

3.  Spatial and temporal variations in local transmission of Schistosoma haematobium in Msambweni, Kenya.

Authors:  Julie A Clennon; Peter L Mungai; Eric M Muchiri; Charles H King; Uriel Kitron
Journal:  Am J Trop Med Hyg       Date:  2006-12       Impact factor: 2.345

Review 4.  China's new strategy to block Schistosoma japonicum transmission: experiences and impact beyond schistosomiasis.

Authors:  Long-De Wang; Jia-Gang Guo; Xiao-Hua Wu; Hong-Gen Chen; Tian-Ping Wang; Shao-Ping Zhu; Zhi-Hai Zhang; Peter Steinmann; Guo-Jing Yang; Shi-Ping Wang; Zhong-Dao Wu; Li-Ying Wang; Yang Hao; Robert Bergquist; Jürg Utzinger; Xiao-Nong Zhou
Journal:  Trop Med Int Health       Date:  2009-09-27       Impact factor: 2.622

5.  Factors affecting infection or reinfection with Schistosoma haematobium in coastal Kenya: survival analysis during a nine-year, school-based treatment program.

Authors:  Sudtida A Satayathum; Eric M Muchiri; John H Ouma; Christopher C Whalen; Charles H King
Journal:  Am J Trop Med Hyg       Date:  2006-07       Impact factor: 2.345

6.  Polymerase chain reaction assay based on a highly repeated sequence of Schistosoma haematobium: a potential tool for monitoring schistosome-infested water.

Authors:  J Hamburger; I Abbasi; R M Ramzy; J Jourdane; A Ruppel
Journal:  Am J Trop Med Hyg       Date:  2001-12       Impact factor: 2.345

7.  Large-scale, polymerase chain reaction-based surveillance of Schistosoma haematobium DNA in snails from transmission sites in coastal Kenya: a new tool for studying the dynamics of snail infection.

Authors:  Joseph Hamburger; Orit Hoffman; H Curtis Kariuki; Eric M Muchiri; John H Ouma; Davy K Koech; Robert F Sturrock; Charles H King
Journal:  Am J Trop Med Hyg       Date:  2004-12       Impact factor: 2.345

8.  A polymerase chain reaction assay for detecting snails infected with bilharzia parasites (Schistosoma mansoni) from very early prepatency.

Authors:  J Hamburger; X Y Xin; R M Ramzy; J Jourdane; A Ruppel
Journal:  Am J Trop Med Hyg       Date:  1998-12       Impact factor: 2.345

9.  Differentiation of Schistosoma haematobium from related schistosomes by PCR amplifying an inter-repeat sequence.

Authors:  Ibrahim Abbasi; Charles H King; Robert F Sturrock; Curtis Kariuki; Eric Muchiri; Joseph Hamburger
Journal:  Am J Trop Med Hyg       Date:  2007-05       Impact factor: 2.345

10.  Rapid diagnostic multiplex PCR (RD-PCR) to discriminate Schistosoma haematobium and S. bovis.

Authors:  B L Webster; D Rollinson; J R Stothard; T Huyse
Journal:  J Helminthol       Date:  2009-08-03       Impact factor: 2.170

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  34 in total

1.  Testing the Infection Prevalence of Schistosoma mansoni after Mass Drug Administration by Comparing Sensitivity and Specificity of Species-Specific Repeat Fragment Amplification by PCR and Loop-Mediated Isothermal Amplification.

Authors:  Miriam Price; Austin Cyrs; Chummy S Sikasunge; James Mwansa; Nilanjan Lodh
Journal:  Am J Trop Med Hyg       Date:  2019-07       Impact factor: 2.345

Review 2.  Critical review of methods for isothermal amplification of nucleic acids for environmental analysis.

Authors:  Dana M Nieuwkerk; Asja Korajkic; Erika L Valdespino; Michael P Herrmann; Valerie J Harwood
Journal:  J Microbiol Methods       Date:  2020-11-05       Impact factor: 2.363

Review 3.  The Road to Elimination: Current State of Schistosomiasis Research and Progress Towards the End Game.

Authors:  Paul Ogongo; Ruth K Nyakundi; Gerald K Chege; Lucy Ochola
Journal:  Front Immunol       Date:  2022-05-03       Impact factor: 8.786

4.  Development and Evaluation of a Loop-Mediated Isothermal Amplification Assay for the Detection of Treponema pallidum DNA in the Peripheral Blood of Secondary Syphilis Patients.

Authors:  Yongjian Xiao; Yafeng Xie; Man Xu; Shuangquan Liu; Chuanhao Jiang; Feijun Zhao; Tiebing Zeng; Zhuoran Liu; Jian Yu; Yimou Wu
Journal:  Am J Trop Med Hyg       Date:  2017-09-28       Impact factor: 2.345

5.  Improved sensitivity of the urine CAA lateral-flow assay for diagnosing active Schistosoma infections by using larger sample volumes.

Authors:  Paul L A M Corstjens; Ruth K Nyakundi; Claudia J de Dood; Thomas M Kariuki; Elizabeth A Ochola; Diana M S Karanja; Pauline N M Mwinzi; Govert J van Dam
Journal:  Parasit Vectors       Date:  2015-04-22       Impact factor: 3.876

6.  A loop-mediated isothermal amplification (LAMP) assay for early detection of Schistosoma mansoni in stool samples: a diagnostic approach in a murine model.

Authors:  Pedro Fernández-Soto; Javier Gandasegui Arahuetes; Alicia Sánchez Hernández; Julio López Abán; Belén Vicente Santiago; Antonio Muro
Journal:  PLoS Negl Trop Dis       Date:  2014-09-04

7.  Sclerotinia homoeocarpa overwinters in turfgrass and is present in commercial seed.

Authors:  Renée A Rioux; Jeanette Shultz; Michelle Garcia; David Kyle Willis; Michael Casler; Stacy Bonos; Damon Smith; James Kerns
Journal:  PLoS One       Date:  2014-10-21       Impact factor: 3.240

8.  Relative compatibility of Schistosoma mansoni with Biomphalaria sudanica and B. pfeifferi from Kenya as assessed by PCR amplification of the S. mansoni ND5 gene in conjunction with traditional methods.

Authors:  Lijun Lu; Si-Ming Zhang; Martin W Mutuku; Gerald M Mkoji; Eric S Loker
Journal:  Parasit Vectors       Date:  2016-03-21       Impact factor: 3.876

Review 9.  Challenges and Opportunities Presented by Current Techniques for Detecting Schistosome Infections in Intermediate Host Snails: A Scoping Review.

Authors:  Onyekachi Esther Nwoko; John J O Mogaka; Moses John Chimbari
Journal:  Int J Environ Res Public Health       Date:  2021-05-19       Impact factor: 3.390

10.  The Rapid-Heat LAMPellet Method: A Potential Diagnostic Method for Human Urogenital Schistosomiasis.

Authors:  Javier Gandasegui; Pedro Fernández-Soto; Cristina Carranza-Rodríguez; José Luis Pérez-Arellano; Belén Vicente; Julio López-Abán; Antonio Muro
Journal:  PLoS Negl Trop Dis       Date:  2015-07-31
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