Literature DB >> 23208211

Detection of nasopharyngeal cancer using confocal Raman spectroscopy and genetic algorithm technique.

Shao-Xin Li1, Qiu-Yan Chen, Yan-Jiao Zhang, Zhi-Ming Liu, Hong-Lian Xiong, Zhou-Yi Guo, Hai-Qiang Mai, Song-Hao Liu.   

Abstract

Raman spectroscopy (RS) and a genetic algorithm (GA) were applied to distinguish nasopharyngeal cancer (NPC) from normal nasopharyngeal tissue. A total of 225 Raman spectra are acquired from 120 tissue sites of 63 nasopharyngeal patients, 56 Raman spectra from normal tissue and 169 Raman spectra from NPC tissue. The GA integrated with linear discriminant analysis (LDA) is developed to differentiate NPC and normal tissue according to spectral variables in the selected regions of 792-805, 867-880, 996-1009, 1086-1099, 1288-1304, 1663-1670, and 1742-1752 cm-1 related to proteins, nucleic acids and lipids of tissue. The GA-LDA algorithms with the leave-one-out cross-validation method provide a sensitivity of 69.2% and specificity of 100%. The results are better than that of principal component analysis which is applied to the same Raman dataset of nasopharyngeal tissue with a sensitivity of 63.3% and specificity of 94.6%. This demonstrates that Raman spectroscopy associated with GA-LDA diagnostic algorithm has enormous potential to detect and diagnose nasopharyngeal cancer.

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Year:  2012        PMID: 23208211     DOI: 10.1117/1.JBO.17.12.125003

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  4 in total

1.  Rapid detection of nasopharyngeal cancer using Raman spectroscopy and multivariate statistical analysis.

Authors:  Yongzeng Li; Wei Huang; Jianji Pan; Qing Ye; Shaojun Lin; Shangyuan Feng; Shusen Xie; Haishan Zeng; Rong Chen
Journal:  Mol Clin Oncol       Date:  2014-12-02

2.  Characterization and noninvasive diagnosis of bladder cancer with serum surface enhanced Raman spectroscopy and genetic algorithms.

Authors:  Shaoxin Li; Linfang Li; Qiuyao Zeng; Yanjiao Zhang; Zhouyi Guo; Zhiming Liu; Mei Jin; Chengkang Su; Lin Lin; Junfa Xu; Songhao Liu
Journal:  Sci Rep       Date:  2015-05-07       Impact factor: 4.379

3.  Raman spectroscopy analysis of the biochemical characteristics of molecules associated with the malignant transformation of gastric mucosa.

Authors:  Yao Chen; Jianhua Dai; Xueqian Zhou; Yunjie Liu; Wei Zhang; Guiyong Peng
Journal:  PLoS One       Date:  2014-04-07       Impact factor: 3.240

4.  Extreme Point Sort Transformation Combined With a Long Short-Term Memory Network Algorithm for the Raman-Based Identification of Therapeutic Monoclonal Antibodies.

Authors:  Jin Ling; Luxia Zheng; Mingming Xu; Gang Chen; Xiao Wang; Danzhuo Mao; Hong Shao
Journal:  Front Chem       Date:  2022-04-13       Impact factor: 5.545

  4 in total

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