Literature DB >> 23207799

Genome-wide association study identified UQCC locus for spine bone size in humans.

Fei-Yan Deng1, Shan-Shan Dong, Xiang-Hong Xu, Yong-Jun Liu, Yao-Zhong Liu, Hui Shen, Qing Tian, Jian Li, Hong-Wen Deng.   

Abstract

Bone size (BS) contributes significantly to the risk of osteoporotic fracture. Osteoporotic spine fracture is one of the most disabling outcomes of osteoporosis. This study aims to identify genomic loci underlying spine BS variation in humans. We performed a genome-wide association scan in 2286 unrelated Caucasians using Affymetrix 6.0 SNP arrays. Areal BS (cm(2)) at lumbar spine was measured using dual energy X-ray absorptiometry scanners. SNPs of interest were subjected to replication analyses and meta-analyses with additional two independent Caucasian populations (N=1000 and 2503) and one Chinese population (N=1627). In the initial GWAS, 91 SNPs were associated with spine BS (P<1.0E-4). Eight contiguous SNPs were found clustering in a haplotype block within UQCC gene (ubiquinol-cytochrome creductase complex chaperone). Association of the above eight SNPs with spine BS was replicated in one Caucasian and one Chinese populations. Meta-analyses (N=7416) generated much stronger association signals for these SNPs (e.g., P=1.86E-07 for SNP rs6060373), supporting association of UQCC with spine BS across ethnicities. This study identified a novel locus, i.e., the UQCC gene, for spine BS variation in humans. Future functional studies will contribute to elucidating the mechanisms by which UQCC regulates bone growth and development.
Copyright © 2012 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23207799      PMCID: PMC3682469          DOI: 10.1016/j.bone.2012.11.028

Source DB:  PubMed          Journal:  Bone        ISSN: 1873-2763            Impact factor:   4.398


  18 in total

1.  Haploview: analysis and visualization of LD and haplotype maps.

Authors:  J C Barrett; B Fry; J Maller; M J Daly
Journal:  Bioinformatics       Date:  2004-08-05       Impact factor: 6.937

2.  Association and haplotype analyses of the COL1A2 and ER-alpha gene polymorphisms with bone size and height in Chinese.

Authors:  Shu-Feng Lei; Fei-Yan Deng; Su-Mei Xiao; Xiang-Ding Chen; Hong-Wen Deng
Journal:  Bone       Date:  2005-03       Impact factor: 4.398

3.  Differences in bone mineral density, bone mineral content, and bone areal size in fracturing and non-fracturing women, and their interrelationships at the spine and hip.

Authors:  Hong-Wen Deng; Fu-Hua Xu; K Michael Davies; Robert Heaney; Robert R Recker
Journal:  J Bone Miner Metab       Date:  2002       Impact factor: 2.626

4.  Fracture site-specific deficits in bone size and volumetric density in men with spine or hip fractures.

Authors:  E Seeman; Y Duan; C Fong; J Edmonds
Journal:  J Bone Miner Res       Date:  2001-01       Impact factor: 6.741

5.  Mutations in CDMP1 cause autosomal dominant brachydactyly type C.

Authors:  A Polinkovsky; N H Robin; J T Thomas; M Irons; A Lynn; F R Goodman; W Reardon; S G Kant; H G Brunner; I van der Burgt; D Chitayat; J McGaughran; D Donnai; F P Luyten; M L Warman
Journal:  Nat Genet       Date:  1997-09       Impact factor: 38.330

6.  Disruption of human limb morphogenesis by a dominant negative mutation in CDMP1.

Authors:  J T Thomas; M W Kilpatrick; K Lin; L Erlacher; P Lembessis; T Costa; P Tsipouras; F P Luyten
Journal:  Nat Genet       Date:  1997-09       Impact factor: 38.330

7.  A common promotor variant in the cytochrome P450c17alpha (CYP17) gene is associated with bioavailability testosterone levels and bone size in men.

Authors:  J M Zmuda; J A Cauley; L H Kuller; R E Ferrell
Journal:  J Bone Miner Res       Date:  2001-05       Impact factor: 6.741

8.  A human chondrodysplasia due to a mutation in a TGF-beta superfamily member.

Authors:  J T Thomas; K Lin; M Nandedkar; M Camargo; J Cervenka; F P Luyten
Journal:  Nat Genet       Date:  1996-03       Impact factor: 38.330

9.  Determination of bone size of hip, spine, and wrist in human pedigrees by genetic and lifestyle factors.

Authors:  Hong-Wen Deng; Xu-Tao Deng; Theresa Conway; Fu-Hua Xu; Robert Heaney; Robert R Recker
Journal:  J Clin Densitom       Date:  2002       Impact factor: 2.963

10.  Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.

Authors:  Nicole Soranzo; Fernando Rivadeneira; Usha Chinappen-Horsley; Ida Malkina; J Brent Richards; Naomi Hammond; Lisette Stolk; Alexandra Nica; Michael Inouye; Albert Hofman; Jonathan Stephens; Eleanor Wheeler; Pascal Arp; Rhian Gwilliam; P Mila Jhamai; Simon Potter; Amy Chaney; Mohammed J R Ghori; Radhi Ravindrarajah; Sergey Ermakov; Karol Estrada; Huibert A P Pols; Frances M Williams; Wendy L McArdle; Joyce B van Meurs; Ruth J F Loos; Emmanouil T Dermitzakis; Kourosh R Ahmadi; Deborah J Hart; Willem H Ouwehand; Nicholas J Wareham; Inês Barroso; Manjinder S Sandhu; David P Strachan; Gregory Livshits; Timothy D Spector; André G Uitterlinden; Panos Deloukas
Journal:  PLoS Genet       Date:  2009-04-03       Impact factor: 5.917

View more
  9 in total

1.  Novel gene associated with spinal bone size.

Authors: 
Journal:  Bonekey Rep       Date:  2013-03-13

2.  Pleiotropic loci underlying bone mineral density and bone size identified by a bivariate genome-wide association analysis.

Authors:  H Zhang; L Liu; J-J Ni; X-T Wei; G-J Feng; X-L Yang; Q Xu; Z-J Zhang; R Hai; Q Tian; H Shen; H-W Deng; Y-F Pei; L Zhang
Journal:  Osteoporos Int       Date:  2020-04-20       Impact factor: 4.507

3.  The Association Between BMP-2, UQCC1 and CX3CR1 Polymorphisms and the Risk of Developmental Dysplasia of the Hip.

Authors:  Evren Gumus; Ebru Temiz; Baran Sarikaya; Ozgur Yuksekdag; Serkan Sipahioglu; Ataman Gonel
Journal:  Indian J Orthop       Date:  2020-08-29       Impact factor: 1.251

4.  Composite Selection Signals for Complex Traits Exemplified Through Bovine Stature Using Multibreed Cohorts of European and African Bos taurus.

Authors:  Imtiaz A S Randhawa; Mehar S Khatkar; Peter C Thomson; Herman W Raadsma
Journal:  G3 (Bethesda)       Date:  2015-04-30       Impact factor: 3.154

5.  Mutations in the UQCC1-interacting protein, UQCC2, cause human complex III deficiency associated with perturbed cytochrome b protein expression.

Authors:  Elena J Tucker; Bas F J Wanschers; Radek Szklarczyk; Hayley S Mountford; Xiaonan W Wijeyeratne; Mariël A M van den Brand; Anne M Leenders; Richard J Rodenburg; Boris Reljić; Alison G Compton; Ann E Frazier; Damien L Bruno; John Christodoulou; Hitoshi Endo; Michael T Ryan; Leo G Nijtmans; Martijn A Huynen; David R Thorburn
Journal:  PLoS Genet       Date:  2013-12-26       Impact factor: 5.917

6.  A common variant of ubiquinol-cytochrome c reductase complex is associated with DDH.

Authors:  Ye Sun; Cheng Wang; Zheng Hao; Jin Dai; Dongyang Chen; Zhihong Xu; Dongquan Shi; Ping Mao; Huajian Teng; Xiang Gao; Zhibin Hu; Hongbing Shen; Qing Jiang
Journal:  PLoS One       Date:  2015-04-07       Impact factor: 3.240

7.  Genome-wide association study of developmental dysplasia of the hip identifies an association with GDF5.

Authors:  Konstantinos Hatzikotoulas; Andreas Roposch; Karan M Shah; Matthew J Clark; Selina Bratherton; Vasanti Limbani; Julia Steinberg; Eleni Zengini; Kaltuun Warsame; Madhushika Ratnayake; Maria Tselepi; Jeremy Schwartzentruber; John Loughlin; Deborah M Eastwood; Eleftheria Zeggini; J Mark Wilkinson
Journal:  Commun Biol       Date:  2018-05-31

Review 8.  Twelve years of GWAS discoveries for osteoporosis and related traits: advances, challenges and applications.

Authors:  Xiaowei Zhu; Weiyang Bai; Houfeng Zheng
Journal:  Bone Res       Date:  2021-04-29       Impact factor: 13.567

Review 9.  The Genetic Epidemiology of Joint Shape and the Development of Osteoarthritis.

Authors:  J Mark Wilkinson; Eleftheria Zeggini
Journal:  Calcif Tissue Int       Date:  2020-05-11       Impact factor: 4.333

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.