Literature DB >> 23207013

A growth model of human papillomavirus type 16 designed from cellular automata and agent-based models.

María Elena Escobar Ospina1, Jonatan Gómez Perdomo.   

Abstract

OBJECTIVE: This paper presents a conceptual model that is developed upon a characterization of human papillomavirus type 16 (HPV16) which is used to build a simulation prototype of the HPV16 growth process.
METHODOLOGY: The human papillomavirus type 16 is the principal virus detected in invasive lesions of cervical cancer, and associated with the greater persistence and prevalence in pre-malignant and malignant lesions. The probability of acquiring an infection with HPV16 is extremely high in sexually active individuals. However, an HPV16 infection can disappear after becoming a histological confirmed case. According to the characterization of HPV16 proposed in this paper, cells as compared to a society behaves as a complex system, i.e., cells behave in a cooperative manner, following a set of rules defined by local interactions among them. Such complex system is defined by combining a cellular automaton and agent-based models. In this way, the behavior of the HPV16 is simulated by allowing the cellular automaton to follow such parameterized behavior rules.
RESULTS: Both cross-sectional and prospective studies indicate that HPV16 infection persistence increase the risk of high-grade CIN, as observed in the results provided by the growth simulation model of HPV16. The average growth rate extrapolated over 52 weeks (12 months) and calculated by the model showed a 37.87% growth for CIN1, 35.53% for CIN2 and 16.92% for CIN3. Remarkably, these results are similar to the results obtained and reported by clinical studies. For example, the results obtained using the proposed model for CIN2 and the results obtained by Östör [36], have a differential of 0.53 percentage points while have a differential of 2.23 percentage points with the results obtained by Insinga et al. [51]. Also, for the CIN3, the results obtained using the proposed model, have a differential of 2.92 percentage points with the Insinga et al. [52], results.
CONCLUSION: Through the specification of parameterized behavior rules for HPV16 that are simulated under the combined technique of cellular automata and agent-based models, the HPV life cycle can be simulated allowing for observations at different stages. The proposed model then can be used as a support tool in the investigation of HPV16, in particular (as part of our future work) to develop drugs as agents in the control of the HPV16 disease.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23207013     DOI: 10.1016/j.artmed.2012.11.001

Source DB:  PubMed          Journal:  Artif Intell Med        ISSN: 0933-3657            Impact factor:   5.326


  4 in total

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Authors:  Ferdinando Chiacchio; Marzio Pennisi; Giulia Russo; Santo Motta; Francesco Pappalardo
Journal:  Biomed Res Int       Date:  2014-04-22       Impact factor: 3.411

2.  In silico/In vivo analysis of high-risk papillomavirus L1 and L2 conserved sequences for development of cross-subtype prophylactic vaccine.

Authors:  Ali Namvar; Azam Bolhassani; Gholamreza Javadi; Zahra Noormohammadi
Journal:  Sci Rep       Date:  2019-10-23       Impact factor: 4.379

3.  Modeling cell adhesion and proliferation: a cellular-automata based approach.

Authors:  J Vivas; D Garzón-Alvarado; M Cerrolaza
Journal:  Adv Model Simul Eng Sci       Date:  2015-12-02

4.  Modeling the dynamics of chromosomal alteration progression in cervical cancer: A computational model.

Authors:  Augusto Cabrera-Becerril; Cruz Vargas-De-León; Sergio Hernández; Pedro Miramontes; Raúl Peralta
Journal:  PLoS One       Date:  2017-07-19       Impact factor: 3.240

  4 in total

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