Literature DB >> 23206561

Profiling metabolic networks to study cancer metabolism.

Karsten Hiller1, Christian M Metallo.   

Abstract

Cancer is a disease of unregulated cell growth and survival, and tumors reprogram biochemical pathways to aid these processes. New capabilities in the computational and bioanalytical characterization of metabolism have now emerged, facilitating the identification of unique metabolic dependencies that arise in specific cancers. By understanding the metabolic phenotype of cancers as a function of their oncogenic profiles, metabolic engineering may be applied to design synthetically lethal therapies for some tumors. This process begins with accurate measurement of metabolic fluxes. Here we review advanced methods of quantifying pathway activity and highlight specific examples where these approaches have uncovered potential opportunities for therapeutic intervention.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23206561     DOI: 10.1016/j.copbio.2012.11.001

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  45 in total

Review 1.  Publishing 13C metabolic flux analysis studies: a review and future perspectives.

Authors:  Scott B Crown; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2013-09-08       Impact factor: 9.783

2.  Oxidation of alpha-ketoglutarate is required for reductive carboxylation in cancer cells with mitochondrial defects.

Authors:  Andrew R Mullen; Zeping Hu; Xiaolei Shi; Lei Jiang; Lindsey K Boroughs; Zoltan Kovacs; Richard Boriack; Dinesh Rakheja; Lucas B Sullivan; W Marston Linehan; Navdeep S Chandel; Ralph J DeBerardinis
Journal:  Cell Rep       Date:  2014-05-22       Impact factor: 9.423

Review 3.  Review of metabolic pathways activated in cancer cells as determined through isotopic labeling and network analysis.

Authors:  Wentao Dong; Mark A Keibler; Gregory Stephanopoulos
Journal:  Metab Eng       Date:  2017-02-10       Impact factor: 9.783

Review 4.  Methods and advances in metabolic flux analysis: a mini-review.

Authors:  Maciek R Antoniewicz
Journal:  J Ind Microbiol Biotechnol       Date:  2015-01-23       Impact factor: 3.346

5.  Microscale Mass Spectrometry Analysis of Extracellular Metabolites in Live Multicellular Tumor Spheroids.

Authors:  Mei Sun; Xiang Tian; Zhibo Yang
Journal:  Anal Chem       Date:  2017-08-16       Impact factor: 6.986

Review 6.  Spatiotemporal Imaging of Cellular Energy Metabolism with Genetically-Encoded Fluorescent Sensors in Brain.

Authors:  Zhuo Zhang; Weicai Chen; Yuzheng Zhao; Yi Yang
Journal:  Neurosci Bull       Date:  2018-04-20       Impact factor: 5.203

Review 7.  A roadmap for interpreting (13)C metabolite labeling patterns from cells.

Authors:  Joerg M Buescher; Maciek R Antoniewicz; Laszlo G Boros; Shawn C Burgess; Henri Brunengraber; Clary B Clish; Ralph J DeBerardinis; Olivier Feron; Christian Frezza; Bart Ghesquiere; Eyal Gottlieb; Karsten Hiller; Russell G Jones; Jurre J Kamphorst; Richard G Kibbey; Alec C Kimmelman; Jason W Locasale; Sophia Y Lunt; Oliver D K Maddocks; Craig Malloy; Christian M Metallo; Emmanuelle J Meuillet; Joshua Munger; Katharina Nöh; Joshua D Rabinowitz; Markus Ralser; Uwe Sauer; Gregory Stephanopoulos; Julie St-Pierre; Daniel A Tennant; Christoph Wittmann; Matthew G Vander Heiden; Alexei Vazquez; Karen Vousden; Jamey D Young; Nicola Zamboni; Sarah-Maria Fendt
Journal:  Curr Opin Biotechnol       Date:  2015-02-28       Impact factor: 9.740

8.  Integrated 13C-metabolic flux analysis of 14 parallel labeling experiments in Escherichia coli.

Authors:  Scott B Crown; Christopher P Long; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2015-01-14       Impact factor: 9.783

Review 9.  Understanding metabolism with flux analysis: From theory to application.

Authors:  Ziwei Dai; Jason W Locasale
Journal:  Metab Eng       Date:  2016-09-22       Impact factor: 9.783

10.  ATP citrate lyase mediates resistance of colorectal cancer cells to SN38.

Authors:  Yunfei Zhou; Lakshmi Reddy Bollu; Federico Tozzi; Xiangcang Ye; Rajat Bhattacharya; Guang Gao; Elizabeth Dupre; Ling Xia; Jia Lu; Fan Fan; Seth Bellister; Lee M Ellis; Zhang Weihua
Journal:  Mol Cancer Ther       Date:  2013-10-16       Impact factor: 6.261

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