Literature DB >> 23201561

Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production.

Siomar C Soares1, Eva Trost, Rommel T J Ramos, Adriana R Carneiro, Anderson R Santos, Anne C Pinto, Eudes Barbosa, Flávia Aburjaile, Amjad Ali, Carlos A A Diniz, Syed S Hassan, Karina Fiaux, Luis C Guimarães, Syeda M Bakhtiar, Ulisses Pereira, Sintia S Almeida, Vinícius A C Abreu, Flávia S Rocha, Fernanda A Dorella, Anderson Miyoshi, Artur Silva, Vasco Azevedo, Andreas Tauch.   

Abstract

Corynebacterium pseudotuberculosis is the causative agent of several veterinary diseases in a broad range of economically important hosts, which can vary from caseous lymphadenitis in sheep and goats (biovar ovis) to ulcerative lymphangitis in cattle and horses (biovar equi). Existing vaccines against C. pseudotuberculosis are mainly intended for small ruminants and, even in these hosts, they still present remarkable limitations. In this study, we present the complete genome sequence of C. pseudotuberculosis biovar equi strain 258, isolated from a horse with ulcerative lymphangitis. The genome has a total size of 2,314,404 bp and contains 2088 predicted protein-coding regions. Using in silico analysis, eleven pathogenicity islands were detected in the genome sequence of C. pseudotuberculosis 258. The application of a reverse vaccinology strategy identified 49 putative antigenic proteins, which can be used as candidate vaccine targets in future works.
Copyright © 2012 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Caseous lymphadenitis; Corynebacterium pseudotuberculosis; Genome sequence; Pathogenicity island; Reverse vaccinology

Mesh:

Substances:

Year:  2012        PMID: 23201561     DOI: 10.1016/j.jbiotec.2012.11.003

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  23 in total

1.  Putative vaccine candidates and drug targets identified by reverse vaccinology and subtractive genomics approaches to control Haemophilus ducreyi, the causative agent of chancroid.

Authors:  Alissa de Sarom; Arun Kumar Jaiswal; Sandeep Tiwari; Letícia de Castro Oliveira; Debmalya Barh; Vasco Azevedo; Carlo Jose Oliveira; Siomar de Castro Soares
Journal:  J R Soc Interface       Date:  2018-05       Impact factor: 4.118

2.  Complete genome sequence of Vibrio mimicus strain SCCF01 with potential application in fish vaccine development.

Authors:  Zehui Yu; Yi Geng; Kaiyu Wang; Defang Chen; Xiaoli Huang; Yangping Ou; Guangneng Peng
Journal:  Virulence       Date:  2016-10-20       Impact factor: 5.882

3.  An integrated structural proteomics approach along the druggable genome of Corynebacterium pseudotuberculosis species for putative druggable targets.

Authors:  Leandro G Radusky; Syed Hassan; Esteban Lanzarotti; Sandeep Tiwari; Syed Jamal; Javed Ali; Amjad Ali; Rafaela Ferreira; Debmalya Barh; Artur Silva; Adrián G Turjanski; Vasco Ac Azevedo
Journal:  BMC Genomics       Date:  2015-05-26       Impact factor: 3.969

4.  Proteome scale comparative modeling for conserved drug and vaccine targets identification in Corynebacterium pseudotuberculosis.

Authors:  Syed Shah Hassan; Sandeep Tiwari; Luís Carlos Guimarães; Syed Babar Jamal; Edson Folador; Neha Barve Sharma; Siomar de Castro Soares; Síntia Almeida; Amjad Ali; Arshad Islam; Fabiana Dias Póvoa; Vinicius Augusto Carvalho de Abreu; Neha Jain; Antaripa Bhattacharya; Lucky Juneja; Anderson Miyoshi; Artur Silva; Debmalya Barh; Adrian Gustavo Turjanski; Vasco Azevedo; Rafaela Salgado Ferreira
Journal:  BMC Genomics       Date:  2014-10-27       Impact factor: 3.969

5.  Genome Sequence of Corynebacterium pseudotuberculosis MB20 bv. equi Isolated from a Pectoral Abscess of an Oldenburg Horse in California.

Authors:  Rafael A Baraúna; Luís C Guimarães; Adonney A O Veras; Pablo H C G de Sá; Diego A Graças; Kenny C Pinheiro; Andreia S S Silva; Edson L Folador; Leandro J Benevides; Marcus V C Viana; Adriana R Carneiro; Maria P C Schneider; Sharon J Spier; Judy M Edman; Rommel T J Ramos; Vasco Azevedo; Artur Silva
Journal:  Genome Announc       Date:  2014-11-13

6.  Genomic analysis of four strains of Corynebacterium pseudotuberculosis bv. Equi isolated from horses showing distinct signs of infection.

Authors:  Rafael A Baraúna; Rommel T J Ramos; Adonney A O Veras; Pablo H C G de Sá; Luís C Guimarães; Diego A das Graças; Adriana R Carneiro; Judy M Edman; Sharon J Spier; Vasco Azevedo; Artur Silva
Journal:  Stand Genomic Sci       Date:  2017-01-31

7.  Quadruplex PCR assay for identification of Corynebacterium pseudotuberculosis differentiating biovar Ovis and Equi.

Authors:  Sintia Almeida; Elaine M S Dorneles; Carlos Diniz; Vinícius Abreu; Cassiana Sousa; Jorianne Alves; Adriana Carneiro; Priscilla Bagano; Sharon Spier; Debmalya Barh; Andrey P Lage; Henrique Figueiredo; Vasco Azevedo
Journal:  BMC Vet Res       Date:  2017-09-25       Impact factor: 2.741

8.  SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.

Authors:  Diego C B Mariano; Felipe L Pereira; Edgar L Aguiar; Letícia C Oliveira; Leandro Benevides; Luís C Guimarães; Edson L Folador; Thiago J Sousa; Preetam Ghosh; Debmalya Barh; Henrique C P Figueiredo; Artur Silva; Rommel T J Ramos; Vasco A C Azevedo
Journal:  BMC Bioinformatics       Date:  2016-12-15       Impact factor: 3.169

9.  The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.

Authors:  Siomar C Soares; Artur Silva; Eva Trost; Jochen Blom; Rommel Ramos; Adriana Carneiro; Amjad Ali; Anderson R Santos; Anne C Pinto; Carlos Diniz; Eudes G V Barbosa; Fernanda A Dorella; Flávia Aburjaile; Flávia S Rocha; Karina K F Nascimento; Luís C Guimarães; Sintia Almeida; Syed S Hassan; Syeda M Bakhtiar; Ulisses P Pereira; Vinicius A C Abreu; Maria P C Schneider; Anderson Miyoshi; Andreas Tauch; Vasco Azevedo
Journal:  PLoS One       Date:  2013-01-14       Impact factor: 3.240

10.  Corynebacterium pseudotuberculosis Pneumonia in a Veterinary Student Infected During Laboratory Work.

Authors:  Lars Heggelund; Peter Gaustad; Othilde Elise Håvelsrud; Jochen Blom; Lars Borgen; Arve Sundset; Henning Sørum; Stig Sophus Frøland
Journal:  Open Forum Infect Dis       Date:  2015-04-15       Impact factor: 3.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.