Literature DB >> 23201476

Structural analysis of cytochrome bc1 complexes: implications to the mechanism of function.

Di Xia1, Lothar Esser, Wai-Kwan Tang, Fei Zhou, Yihui Zhou, Linda Yu, Chang-An Yu.   

Abstract

The cytochrome bc1 complex (bc1) is the mid-segment of the cellular respiratory chain of mitochondria and many aerobic prokaryotic organisms; it is also part of the photosynthetic apparatus of non-oxygenic purple bacteria. The bc1 complex catalyzes the reaction of transferring electrons from the low potential substrate ubiquinol to high potential cytochrome c. Concomitantly, bc1 translocates protons across the membrane, contributing to the proton-motive force essential for a variety of cellular activities such as ATP synthesis. Structural investigations of bc1 have been exceedingly successful, yielding atomic resolution structures of bc1 from various organisms and trapped in different reaction intermediates. These structures have confirmed and unified results of decades of experiments and have contributed to our understanding of the mechanism of bc1 functions as well as its inactivation by respiratory inhibitors. This article is part of a Special Issue entitled: Respiratory complex III and related bc complexes. Published by Elsevier B.V.

Entities:  

Keywords:  Bifurcated electron flow; Bos taurus bc(1); Btbc(1); CA; CL; Control of ISP domain movement; Crystal structure; Cytochrome bc(1) complex; ET; Gallus gallus bc(1); Ggbc(1); ISC; ISP; ISP-ED; MPP; Mechanism of ubiquinol oxidation; Mtbc(1); NCS; Non-crystallographic symmetry; PC; PDB; PE; PI; Q; Q(N); Q(P); QH(2); SC; Scbc(1); TM; b(H); b(L); bc(1); bc(1) from Saccharomyces cerevisiae; cardiolipin; complex III or ubiquinol cytochrome c oxidoreductase or cytochrome bc(1); contact area; electron transfer; extrinsic domain of ISP; from Rhodobacter sphaeroides; high-potential heme or b(562); iron–sulfur cluster; iron–sulfur protein; low-potential heme or b(566); mitochondrial bc(1); mitochondrial processing peptidase; phosphatidylcholine; phosphatidylethanolamine; phosphatidylinositol; protein data bank; rms deviation; root-mean-square deviation; surface complementarity; transmembrane; ubiquinol; ubiquinol oxidation,Rsbc(1); ubiquinone; ubiquinone reduction

Mesh:

Substances:

Year:  2012        PMID: 23201476      PMCID: PMC3593749          DOI: 10.1016/j.bbabio.2012.11.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  108 in total

1.  Use of a photoactivated ruthenium dimer complex to measure electron transfer between the Rieske iron-sulfur protein and cytochrome c(1) in the cytochrome bc(1) complex.

Authors:  R C Sadoski; G Engstrom; H Tian; L Zhang; C A Yu; L Yu; B Durham; F Millett
Journal:  Biochemistry       Date:  2000-04-18       Impact factor: 3.162

2.  Confirmation of the involvement of protein domain movement during the catalytic cycle of the cytochrome bc1 complex by the formation of an intersubunit disulfide bond between cytochrome b and the iron-sulfur protein.

Authors:  K Xiao; L Yu; C A Yu
Journal:  J Biol Chem       Date:  2000-12-08       Impact factor: 5.157

3.  Changes to the length of the flexible linker region of the Rieske protein impair the interaction of ubiquinol with the cytochrome bc1 complex.

Authors:  J H Nett; C Hunte; B L Trumpower
Journal:  Eur J Biochem       Date:  2000-09

4.  A spectroscopic method for observing the domain movement of the Rieske iron-sulfur protein.

Authors:  M Brugna; S Rodgers; A Schricker; G Montoya; M Kazmeier; W Nitschke; I Sinning
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

5.  Reaction of Escherichia coli cytochrome bo(3) and mitochondrial cytochrome bc(1) with a photoreleasable decylubiquinol.

Authors:  K C Hansen; B E Schultz; G Wang; S I Chan
Journal:  Biochim Biophys Acta       Date:  2000-01-10

6.  Structure at 2.3 A resolution of the cytochrome bc(1) complex from the yeast Saccharomyces cerevisiae co-crystallized with an antibody Fv fragment.

Authors:  C Hunte; J Koepke; C Lange; T Rossmanith; H Michel
Journal:  Structure       Date:  2000-06-15       Impact factor: 5.006

7.  Crystallographic location of two Zn(2+)-binding sites in the avian cytochrome bc(1) complex.

Authors:  E A Berry; Z Zhang; H D Bellamy; L Huang
Journal:  Biochim Biophys Acta       Date:  2000-08-15

8.  Phospholipase digestion of bound cardiolipin reversibly inactivates bovine cytochrome bc1.

Authors:  B Gomez; N C Robinson
Journal:  Biochemistry       Date:  1999-07-13       Impact factor: 3.162

9.  Mutations in the tether region of the iron-sulfur protein affect the activity and assembly of the cytochrome bc(1) complex of yeast mitochondria.

Authors:  V H Obungu; Y Wang; S M Amyot; C B Gocke; D S Beattie
Journal:  Biochim Biophys Acta       Date:  2000-02-24

10.  Evidence for the head domain movement of the rieske iron-sulfur protein in electron transfer reaction of the cytochrome bc1 complex.

Authors:  H Tian; S White; L Yu; C A Yu
Journal:  J Biol Chem       Date:  1999-03-12       Impact factor: 5.157

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  56 in total

Review 1.  pH-dependent regulation of electron transport and ATP synthesis in chloroplasts.

Authors:  Alexander N Tikhonov
Journal:  Photosynth Res       Date:  2013-05-22       Impact factor: 3.573

2.  Six-Transmembrane Epithelial Antigen of Prostate 1 (STEAP1) Has a Single b Heme and Is Capable of Reducing Metal Ion Complexes and Oxygen.

Authors:  Kwangsoo Kim; Sharmistha Mitra; Gang Wu; Vladimir Berka; Jinmei Song; Ye Yu; Sebastien Poget; Da-Neng Wang; Ah-Lim Tsai; Ming Zhou
Journal:  Biochemistry       Date:  2016-11-17       Impact factor: 3.162

3.  Targeted Structure-Activity Analysis of Endochin-like Quinolones Reveals Potent Qi and Qo Site Inhibitors of Toxoplasma gondii and Plasmodium falciparum Cytochrome bc1 and Identifies ELQ-400 as a Remarkably Effective Compound against Acute Experimental Toxoplasmosis.

Authors:  Erin V McConnell; Igor Bruzual; Sovitj Pou; Rolf Winter; Rozalia A Dodean; Martin J Smilkstein; Alina Krollenbrock; Aaron Nilsen; Lev N Zakharov; Michael K Riscoe; J Stone Doggett
Journal:  ACS Infect Dis       Date:  2018-08-30       Impact factor: 5.084

Review 4.  Molecular mechanisms of superoxide production by complex III: a bacterial versus human mitochondrial comparative case study.

Authors:  Pascal Lanciano; Bahia Khalfaoui-Hassani; Nur Selamoglu; Anna Ghelli; Michela Rugolo; Fevzi Daldal
Journal:  Biochim Biophys Acta       Date:  2013-03-28

5.  Crystal structure of bacterial cytochrome bc 1 in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit.

Authors:  Lothar Esser; Fei Zhou; Chang-An Yu; Di Xia
Journal:  J Biol Chem       Date:  2019-06-10       Impact factor: 5.157

Review 6.  Clarifying the supercomplex: the higher-order organization of the mitochondrial electron transport chain.

Authors:  James A Letts; Leonid A Sazanov
Journal:  Nat Struct Mol Biol       Date:  2017-10-05       Impact factor: 15.369

7.  Structural basis for the interaction of the chaperone Cbp3 with newly synthesized cytochrome b during mitochondrial respiratory chain assembly.

Authors:  Mama Ndi; Geoffrey Masuyer; Hannah Dawitz; Andreas Carlström; Mirco Michel; Arne Elofsson; Mikaela Rapp; Pål Stenmark; Martin Ott
Journal:  J Biol Chem       Date:  2019-09-19       Impact factor: 5.157

8.  Identification of proteins with the CDw75 epitope in human colorectal cancer.

Authors:  Óscar Mariño-Crespo; Almudena Fernández-Briera; Emilio Gil-Martín
Journal:  Oncol Lett       Date:  2017-11-02       Impact factor: 2.967

9.  Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.

Authors:  Lothar Esser; Fei Zhou; Yihui Zhou; Yumei Xiao; Wai-Kwan Tang; Chang-An Yu; Zhaohai Qin; Di Xia
Journal:  J Biol Chem       Date:  2016-10-07       Impact factor: 5.157

Review 10.  Molecular and Supramolecular Structure of the Mitochondrial Oxidative Phosphorylation System: Implications for Pathology.

Authors:  Salvatore Nesci; Fabiana Trombetti; Alessandra Pagliarani; Vittoria Ventrella; Cristina Algieri; Gaia Tioli; Giorgio Lenaz
Journal:  Life (Basel)       Date:  2021-03-15
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