Literature DB >> 23200992

Tracking shallow chemical gradients by actin-driven wandering of the polarization site.

Jayme M Dyer1, Natasha S Savage, Meng Jin, Trevin R Zyla, Timothy C Elston, Daniel J Lew.   

Abstract

BACKGROUND: Many cells are remarkably proficient at tracking very shallow chemical gradients, despite considerable noise from stochastic receptor-ligand interactions. Motile cells appear to undergo a biased random walk: spatial noise in receptor activity may determine the instantaneous direction, but because noise is spatially unbiased, it is filtered out by time averaging, resulting in net movement upgradient. How nonmotile cells might filter out noise is unknown.
RESULTS: Using yeast chemotropic mating as a model, we demonstrate that a polarized patch of polarity regulators "wanders" along the cortex during gradient tracking. Computational and experimental findings suggest that actin-directed membrane traffic contributes to wandering by diluting local polarity factors. The pheromone gradient appears to bias wandering via interactions between receptor-activated Gβγ and polarity regulators. Artificially blocking patch wandering impairs gradient tracking.
CONCLUSIONS: We suggest that the polarity patch undergoes an intracellular biased random walk that enables noise filtering by time averaging, allowing nonmotile cells to track shallow gradients.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23200992      PMCID: PMC3543483          DOI: 10.1016/j.cub.2012.11.014

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  41 in total

1.  G proteins mediate changes in cell shape by stabilizing the axis of polarity.

Authors:  A Nern; R A Arkowitz
Journal:  Mol Cell       Date:  2000-05       Impact factor: 17.970

2.  Site-specific regulation of the GEF Cdc24p by the scaffold protein Far1p during yeast mating.

Authors:  Philippe Wiget; Yukiko Shimada; Anne-Christine Butty; Efrei Bi; Matthias Peter
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

Review 3.  Mechanisms of polarized growth and organelle segregation in yeast.

Authors:  David Pruyne; Aster Legesse-Miller; Lina Gao; Yuqing Dong; Anthony Bretscher
Journal:  Annu Rev Cell Dev Biol       Date:  2004       Impact factor: 13.827

Review 4.  Symmetry breaking and the establishment of cell polarity in budding yeast.

Authors:  Jayme M Johnson; Meng Jin; Daniel J Lew
Journal:  Curr Opin Genet Dev       Date:  2011-09-28       Impact factor: 5.578

5.  Signal input for a chemotactic response in the cellular slime mold Dictyostelium discoideum.

Authors:  J M Mato; A Losada; V Nanjundiah; T M Konijn
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

6.  Specification of sites for polarized growth in Saccharomyces cerevisiae and the influence of external factors on site selection.

Authors:  K Madden; M Snyder
Journal:  Mol Biol Cell       Date:  1992-09       Impact factor: 4.138

7.  Comparison of dose-response curves for alpha factor-induced cell division arrest, agglutination, and projection formation of yeast cells. Implication for the mechanism of alpha factor action.

Authors:  S A Moore
Journal:  J Biol Chem       Date:  1983-11-25       Impact factor: 5.157

8.  The nucleotide exchange factor Cdc24p may be regulated by auto-inhibition.

Authors:  Yukiko Shimada; Philippe Wiget; Marie-Pierre Gulli; Efrei Bi; Matthias Peter
Journal:  EMBO J       Date:  2004-02-26       Impact factor: 11.598

9.  Ability of polymorphonuclear leukocytes to orient in gradients of chemotactic factors.

Authors:  S H Zigmond
Journal:  J Cell Biol       Date:  1977-11       Impact factor: 10.539

10.  The COOH-terminal domain of Myo2p, a yeast myosin V, has a direct role in secretory vesicle targeting.

Authors:  D Schott; J Ho; D Pruyne; A Bretscher
Journal:  J Cell Biol       Date:  1999-11-15       Impact factor: 10.539

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  51 in total

1.  Quantitative analysis of membrane trafficking in regulation of Cdc42 polarity.

Authors:  Leah J Watson; Guendalina Rossi; Patrick Brennwald
Journal:  Traffic       Date:  2014-10-08       Impact factor: 6.215

2.  Imaging Polarization in Budding Yeast.

Authors:  Allison W McClure; Chi-Fang Wu; Sam A Johnson; Daniel J Lew
Journal:  Methods Mol Biol       Date:  2016

3.  Cdc42p-interacting protein Bem4p regulates the filamentous-growth mitogen-activated protein kinase pathway.

Authors:  Andrew Pitoniak; Colin A Chavel; Jacky Chow; Jeremy Smith; Diawoye Camara; Sheelarani Karunanithi; Boyang Li; Kennith H Wolfe; Paul J Cullen
Journal:  Mol Cell Biol       Date:  2014-11-10       Impact factor: 4.272

4.  Parallel Actin-Independent Recycling Pathways Polarize Cdc42 in Budding Yeast.

Authors:  Benjamin Woods; Helen Lai; Chi-Fang Wu; Trevin R Zyla; Natasha S Savage; Daniel J Lew
Journal:  Curr Biol       Date:  2016-07-28       Impact factor: 10.834

5.  Quantitative analysis of the yeast pheromone pathway.

Authors:  James P Shellhammer; Amy E Pomeroy; Yang Li; Lorena Dujmusic; Timothy C Elston; Nan Hao; Henrik G Dohlman
Journal:  Yeast       Date:  2019-06-27       Impact factor: 3.239

6.  Clathrin Assembly Defines the Onset and Geometry of Cortical Patterning.

Authors:  Yang Yang; Ding Xiong; Anne Pipathsouk; Orion D Weiner; Min Wu
Journal:  Dev Cell       Date:  2017-11-20       Impact factor: 12.270

7.  Yeast chemotropism: A paradigm shift in chemical gradient sensing.

Authors:  Amber Ismael; David E Stone
Journal:  Cell Logist       Date:  2017-04-11

Review 8.  Invading, Leading and Navigating Cells in Caenorhabditis elegans: Insights into Cell Movement in Vivo.

Authors:  David R Sherwood; Julie Plastino
Journal:  Genetics       Date:  2018-01       Impact factor: 4.562

Review 9.  Cell Polarity in Yeast.

Authors:  Jian-Geng Chiou; Mohan K Balasubramanian; Daniel J Lew
Journal:  Annu Rev Cell Dev Biol       Date:  2017-08-07       Impact factor: 13.827

10.  Regulation of intrinsic polarity establishment by a differentiation-type MAPK pathway in S. cerevisiae.

Authors:  Aditi Prabhakar; Jacky Chow; Alan J Siegel; Paul J Cullen
Journal:  J Cell Sci       Date:  2020-04-14       Impact factor: 5.285

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