Literature DB >> 23200052

Expanded monomeric intermediate upon cold and heat unfolding of phosphofructokinase-2 from Escherichia coli.

Mauricio Baez1, Christian A M Wilson, César A Ramírez-Sarmiento, Victoria Guixé, Jorge Babul.   

Abstract

Folding studies have been focused mainly on small, single-domain proteins or isolated single domains of larger proteins. However, most of the proteins present in biological systems are composed of multiple domains, and to date, the principles that underlie its folding remain elusive. The unfolding of Pfk-2 induced by GdnHCl has been described by highly cooperative three-state equilibrium (N(2)↔2I↔2U). This is characterized by a strong coupling between the subunits' tertiary structure and the integrity of the dimer interface because "I" represents an unstructured and expanded monomeric intermediate. Here we report that cold and heat unfolding of Pfk-2 resembles the N(2)↔2I step of chemically induced unfolding. Moreover, cold unfolding appears to be as cooperative as that induced chemically and even more so than its heat-unfolding counterpart. Because Pfk-2 is a large homodimer of 66 kDa with a complex topology consisting of well-defined domains, these results are somewhat unexpected considering that cold unfolding has been described as a special kind of perturbation that decouples the cooperative unfolding of several proteins.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23200052      PMCID: PMC3512031          DOI: 10.1016/j.bpj.2012.09.043

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

1.  Cold denaturation of alpha-lactalbumin.

Authors:  M Mizuguchi; D Hashimoto; M Sakurai; K Nitta
Journal:  Proteins       Date:  2000-03-01

Review 2.  Cold denaturation of proteins under high pressure.

Authors:  Shigeru Kunugi; Naoki Tanaka
Journal:  Biochim Biophys Acta       Date:  2002-03-25

Review 3.  The linkage between protein folding and functional cooperativity: two sides of the same coin?

Authors:  Irene Luque; Stephanie A Leavitt; Ernesto Freire
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001-10-25

4.  Difference in the mechanisms of the cold and heat induced unfolding of thioredoxin h from Chlamydomonas reinhardtii: spectroscopic and calorimetric studies.

Authors:  J M Richardson; S D Lemaire; J P Jacquot; G I Makhatadze
Journal:  Biochemistry       Date:  2000-09-12       Impact factor: 3.162

5.  Reversible unfolding of dimeric phosphofructokinase-2 from Escherichia coli reveals a dominant role of inter-subunit contacts for stability.

Authors:  Mauricio Baez; Jorge Babul
Journal:  FEBS Lett       Date:  2009-05-22       Impact factor: 4.124

6.  Folding kinetic pathway of phosphofructokinase-2 from Escherichia coli: a homodimeric enzyme with a complex domain organization.

Authors:  Mauricio Baez; Christian A M Wilson; Jorge Babul
Journal:  FEBS Lett       Date:  2011-05-27       Impact factor: 4.124

7.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

8.  Cooperative effects in binding by bovine serum albumin. I. The binding of 1-anilino-8-naphthalenesulfonate. Fluorimetric titrations.

Authors:  E Daniel; G Weber
Journal:  Biochemistry       Date:  1966-06       Impact factor: 3.162

9.  Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling.

Authors:  P Schuck
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

10.  Crystallographic structure of phosphofructokinase-2 from Escherichia coli in complex with two ATP molecules. Implications for substrate inhibition.

Authors:  Ricardo Cabrera; Andre L B Ambrosio; Richard C Garratt; Victoria Guixé; Jorge Babul
Journal:  J Mol Biol       Date:  2008-08-22       Impact factor: 5.469

View more
  4 in total

1.  Observation of solvent penetration during cold denaturation of E. coli phosphofructokinase-2.

Authors:  César A Ramírez-Sarmiento; Mauricio Baez; Christian A M Wilson; Jorge Babul; Elizabeth A Komives; Victoria Guixé
Journal:  Biophys J       Date:  2013-05-21       Impact factor: 4.033

Review 2.  Hydrogen-deuterium exchange mass spectrometry reveals folding and allostery in protein-protein interactions.

Authors:  Cesar A Ramirez-Sarmiento; Elizabeth A Komives
Journal:  Methods       Date:  2018-04-06       Impact factor: 3.608

3.  The folding unit of phosphofructokinase-2 as defined by the biophysical properties of a monomeric mutant.

Authors:  César A Ramírez-Sarmiento; Mauricio Baez; Ricardo A Zamora; Deepa Balasubramaniam; Jorge Babul; Elizabeth A Komives; Victoria Guixé
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

4.  The Complex Energy Landscape of the Protein IscU.

Authors:  Jameson R Bothe; Marco Tonelli; Ibrahim K Ali; Ziqi Dai; Ronnie O Frederick; William M Westler; John L Markley
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.