Literature DB >> 23199925

The N-terminal actin-binding tandem calponin-homology (CH) domain of dystrophin is in a closed conformation in solution and when bound to F-actin.

Surinder M Singh1, Krishna M G Mallela.   

Abstract

Deficiency of the vital muscle protein dystrophin triggers Duchenne/Becker muscular dystrophy, but the structure-function relationship of dystrophin is poorly understood. To date, molecular structures of three dystrophin domains have been determined, of which the N-terminal actin-binding domain (N-ABD or ABD1) is of particular interest. This domain is composed of two calponin-homology (CH) domains, which form an important class of ABDs in muscle proteins. A previously determined x-ray structure indicates that the dystrophin N-ABD is a domain-swapped dimer, with each monomer adopting an extended, open conformation in which the two CH domains do not interact. This structure is controversial because it contradicts functional studies and known structures of similar ABDs from other muscle proteins. Here, we investigated the solution conformation of the dystrophin N-ABD using a very simple and elegant technique of pyrene excimer fluorescence. Using the wild-type protein, which contains two cysteines, and the corresponding single-cysteine mutants, we show that the protein is a monomer in solution and is in a closed conformation in which the two CH domains seem to interact, as observed from the excimer fluorescence of pyrene-labeled wild-type protein. Excimer fluorescence was also observed in its actin-bound form, indicating that the dystrophin N-ABD binds to F-actin in a closed conformation. Comparison of the dystrophin N-ABD conformation with other ABDs indicates that the tandem CH domains in general may be monomeric in solution and predominantly occur in closed conformation, whereas their actin-bound conformations may differ.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23199925      PMCID: PMC3491715          DOI: 10.1016/j.bpj.2012.08.066

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  46 in total

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Review 2.  Intramolecular pyrene excimer fluorescence: a probe of proximity and protein conformational change.

Authors:  S S Lehrer
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

Review 3.  Function and genetics of dystrophin and dystrophin-related proteins in muscle.

Authors:  Derek J Blake; Andrew Weir; Sarah E Newey; Kay E Davies
Journal:  Physiol Rev       Date:  2002-04       Impact factor: 37.312

Review 4.  Dystrophin, its interactions with other proteins, and implications for muscular dystrophy.

Authors:  James M Ervasti
Journal:  Biochim Biophys Acta       Date:  2006-06-07

5.  Structure of the utrophin actin-binding domain bound to F-actin reveals binding by an induced fit mechanism.

Authors:  C A Moores; N H Keep; J Kendrick-Jones
Journal:  J Mol Biol       Date:  2000-03-24       Impact factor: 5.469

6.  Internal deletion compromises the stability of dystrophin.

Authors:  Davin M Henderson; Joseph J Belanto; Bin Li; Hanke Heun-Johnson; James M Ervasti
Journal:  Hum Mol Genet       Date:  2011-05-10       Impact factor: 6.150

Review 7.  The muscular dystrophies.

Authors:  Alan E H Emery
Journal:  Lancet       Date:  2002-02-23       Impact factor: 79.321

8.  An atomic model for actin binding by the CH domains and spectrin-repeat modules of utrophin and dystrophin.

Authors:  Andrew J Sutherland-Smith; Carolyn A Moores; Fiona L M Norwood; Victoria Hatch; Roger Craig; John Kendrick-Jones; William Lehman
Journal:  J Mol Biol       Date:  2003-05-23       Impact factor: 5.469

Review 9.  Pyrene: a probe to study protein conformation and conformational changes.

Authors:  Gursharan Bains; Arti B Patel; Vasanthy Narayanaswami
Journal:  Molecules       Date:  2011-09-14       Impact factor: 4.411

10.  Utrophin actin binding domain: analysis of actin binding and cellular targeting.

Authors:  S J Winder; L Hemmings; S K Maciver; S J Bolton; J M Tinsley; K E Davies; D R Critchley; J Kendrick-Jones
Journal:  J Cell Sci       Date:  1995-01       Impact factor: 5.285

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  12 in total

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2.  Dystrophin's tandem calponin-homology domains: is the case closed?

Authors:  Neville R Kallenbach; Roberto Dominguez
Journal:  Biophys J       Date:  2012-11-07       Impact factor: 4.033

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Authors:  Jamie Zhang; Jiping Yue; Xiaoyang Wu
Journal:  J Cell Sci       Date:  2017-07-05       Impact factor: 5.285

4.  Dynamics of Dystrophin's Actin-Binding Domain.

Authors:  Michael E Fealey; Benjamin Horn; Christian Coffman; Robert Miller; Ava Y Lin; Andrew R Thompson; Justine Schramel; Erin Groth; Anne Hinderliter; Alessandro Cembran; David D Thomas
Journal:  Biophys J       Date:  2018-06-20       Impact factor: 4.033

5.  F-actin clustering and cell dysmotility induced by the pathological W148R missense mutation of filamin B at the actin-binding domain.

Authors:  Yongtong Zhao; Sandor S Shapiro; Masumi Eto
Journal:  Am J Physiol Cell Physiol       Date:  2015-10-21       Impact factor: 4.249

6.  Missense mutation Lys18Asn in dystrophin that triggers X-linked dilated cardiomyopathy decreases protein stability, increases protein unfolding, and perturbs protein structure, but does not affect protein function.

Authors:  Surinder M Singh; Swati Bandi; Dinen D Shah; Geoffrey Armstrong; Krishna M G Mallela
Journal:  PLoS One       Date:  2014-10-23       Impact factor: 3.240

Review 7.  Structural Characteristics, Binding Partners and Related Diseases of the Calponin Homology (CH) Domain.

Authors:  Lei-Miao Yin; Michael Schnoor; Chang-Duk Jun
Journal:  Front Cell Dev Biol       Date:  2020-05-14

8.  Steric regulation of tandem calponin homology domain actin-binding affinity.

Authors:  Andrew R Harris; Brian Belardi; Pamela Jreij; Kathy Wei; Hengameh Shams; Andreas Bausch; Daniel A Fletcher
Journal:  Mol Biol Cell       Date:  2019-11-06       Impact factor: 4.138

9.  In vivo epidermal migration requires focal adhesion targeting of ACF7.

Authors:  Jiping Yue; Yao Zhang; Wenguang G Liang; Xuewen Gou; Philbert Lee; Han Liu; Wanqing Lyu; Wei-Jen Tang; Shao-Yu Chen; Feng Yang; Hong Liang; Xiaoyang Wu
Journal:  Nat Commun       Date:  2016-05-24       Impact factor: 14.919

10.  Tissue-Specificity of Dystrophin-Actin Interactions: Isoform-Specific Thermodynamic Stability and Actin-Binding Function of Tandem Calponin-Homology Domains.

Authors:  Vaibhav Upadhyay; Swati Bandi; Sudipta Panja; Laura Saba; Krishna M G Mallela
Journal:  ACS Omega       Date:  2020-01-10
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