Literature DB >> 23199741

Prediction model based on decision tree analysis for laccase mediators.

Fabiola Medina1, Sergio Aguila, Maria Camilla Baratto, Andrea Martorana, Riccardo Basosi, Joel B Alderete, Rafael Vazquez-Duhalt.   

Abstract

A Structure Activity Relationship (SAR) study for laccase mediator systems was performed in order to correctly classify different natural phenolic mediators. Decision tree (DT) classification models with a set of five quantum-chemical calculated molecular descriptors were used. These descriptors included redox potential (ɛ°), ionization energy (E(i)), pK(a), enthalpy of formation of radical (Δ(f)H), and OH bond dissociation energy (D(O-H)). The rationale for selecting these descriptors is derived from the laccase-mediator mechanism. To validate the DT predictions, the kinetic constants of different compounds as laccase substrates, their ability for pesticide transformation as laccase-mediators, and radical stability were experimentally determined using Coriolopsis gallica laccase and the pesticide dichlorophen. The prediction capability of the DT model based on three proposed descriptors showed a complete agreement with the obtained experimental results.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23199741     DOI: 10.1016/j.enzmictec.2012.10.009

Source DB:  PubMed          Journal:  Enzyme Microb Technol        ISSN: 0141-0229            Impact factor:   3.493


  4 in total

Review 1.  Spectroscopic and computational characterization of laccases and their substrate radical intermediates.

Authors:  Rebecca Pogni; Maria Camilla Baratto; Adalgisa Sinicropi; Riccardo Basosi
Journal:  Cell Mol Life Sci       Date:  2015-01-17       Impact factor: 9.261

2.  Recovery of laccase-producing gammaproteobacteria from wastewater.

Authors:  John O Unuofin; Anthony I Okoh; Uchechukwu U Nwodo
Journal:  Biotechnol Rep (Amst)       Date:  2019-02-20

3.  Laccase versus laccase-like multi-copper oxidase: a comparative study of similar enzymes with diverse substrate spectra.

Authors:  Renate Reiss; Julian Ihssen; Michael Richter; Eric Eichhorn; Boris Schilling; Linda Thöny-Meyer
Journal:  PLoS One       Date:  2013-06-03       Impact factor: 3.240

4.  Stable ABTS Immobilized in the MIL-100(Fe) Metal-Organic Framework as an Efficient Mediator for Laccase-Catalyzed Decolorization.

Authors:  Youxun Liu; Yuanyuan Geng; Mingyang Yan; Juan Huang
Journal:  Molecules       Date:  2017-06-02       Impact factor: 4.411

  4 in total

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