Literature DB >> 23192036

Expression, crystallization and preliminary X-ray crystallographic analysis of cystathionine γ-synthase (XometB) from Xanthomonas oryzae pv. oryzae.

Ho-Phuong-Thuy Ngo1, Jin-Kwang Kim, Seung-Hwan Kim, Tan-Viet Pham, Thi-Huyen Tran, Dinh-Duc Nguyen, Jeong-Gu Kim, Sumi Chung, Yeh-Jin Ahn, Lin-Woo Kang.   

Abstract

Cystathionine γ-synthase (CGS) catalyzes the first step in the transsulfuration pathway leading to the formation of cystathionine from O-succinylhomoserine and L-cysteine through a γ-replacement reaction. As an antibacterial drug target against Xanthomonas oryzae pv. oryzae (Xoo), CGS from Xoo (XometB) was cloned, expressed, purified and crystallized. The XometB crystal diffracted to 2.4 Å resolution and belonged to the tetragonal space group I4(1), with unit-cell parameters a=b=165.4, c=241.7 Å. There were four protomers in the asymmetric unit, with a corresponding solvent content of 73.9%.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23192036      PMCID: PMC3509977          DOI: 10.1107/S1744309112042819

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

2.  Cystathionine -synthase. The nature of intramolecular proton shifts in the elimination reaction.

Authors:  B I Posner; M Flavin
Journal:  J Biol Chem       Date:  1972-10-25       Impact factor: 5.157

3.  Cystathionine gamma-synthase from Salmonella. Beta elimination and replacement reactions and inhibition by O-succinylserine.

Authors:  S Guggenheim; M Flavin
Journal:  J Biol Chem       Date:  1969-07-10       Impact factor: 5.157

4.  Determinants of enzymatic specificity in the Cys-Met-metabolism PLP-dependent enzymes family: crystal structure of cystathionine gamma-lyase from yeast and intrafamiliar structure comparison.

Authors:  Albrecht Messerschmidt; Michael Worbs; Clemens Steegborn; Markus C Wahl; Robert Huber; Bernd Laber; Tim Clausen
Journal:  Biol Chem       Date:  2003-03       Impact factor: 3.915

5.  Enzymatic characterization and inhibitor discovery of a new cystathionine {gamma}-synthase from Helicobacter pylori.

Authors:  Yunhua Kong; Dalei Wu; Haiyun Bai; Cong Han; Jing Chen; Lili Chen; Lihong Hu; Hualiang Jiang; Xu Shen
Journal:  J Biochem       Date:  2007-11-01       Impact factor: 3.387

6.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

7.  Structure of the cystathionine γ-synthase MetB from Mycobacterium ulcerans.

Authors:  Matthew C Clifton; Jan Abendroth; Thomas E Edwards; David J Leibly; Angela K Gillespie; Micah Ferrell; Shellie H Dieterich; Ilyssa Exley; Bart L Staker; Peter J Myler; Wesley C Van Voorhis; Lance J Stewart
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-08-16

8.  The MORPHEUS protein crystallization screen.

Authors:  Fabrice Gorrec
Journal:  J Appl Crystallogr       Date:  2009-11-07       Impact factor: 3.304

9.  The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice.

Authors:  Byoung-Moo Lee; Young-Jin Park; Dong-Suk Park; Hee-Wan Kang; Jeong-Gu Kim; Eun-Sung Song; In-Cheol Park; Ung-Han Yoon; Jang-Ho Hahn; Bon-Sung Koo; Gil-Bok Lee; Hyungtae Kim; Hyun-Seok Park; Kyong-Oh Yoon; Jeong-Hyun Kim; Chol-hee Jung; Nae-Hyung Koh; Jeong-Sun Seo; Seung-Joo Go
Journal:  Nucleic Acids Res       Date:  2005-01-26       Impact factor: 16.971

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  1 in total

1.  Structures and kinetics of Thermotoga maritima MetY reveal new insights into the predominant sulfurylation enzyme of bacterial methionine biosynthesis.

Authors:  Jodi L Brewster; Petr Pachl; James L O McKellar; Maria Selmer; Christopher J Squire; Wayne M Patrick
Journal:  J Biol Chem       Date:  2021-05-18       Impact factor: 5.157

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.