Literature DB >> 23192032

Crystallization and preliminary X-ray crystallographic analysis of the oxysterol-binding protein Osh3 from Saccharomyces cerevisiae.

Junsen Tong1, Huiseon Yang, Subin Ha, Youngjin Lee, Soo Hyun Eom, Young Jun Im.   

Abstract

Oxysterol-binding protein (OSBP) related proteins (ORPs) are conserved from yeast to humans and are implicated in regulation of sterol homeostasis and in signal transduction pathways. Osh3 of Saccharomyces cerevisiae is a pleckstrin-homology (PH) domain-containing ORP member that regulates phosphoinositide metabolism at endoplasmic reticulum-plasma membrane contact sites. The N-terminal PH domain of Osh3 was purified and crystallized as a lysozyme fusion and the resulting crystal diffracted to 2.3 Å resolution. The crystal belonged to the monoclinic space group C2, with unit-cell parameters a=98.03, b=91.31, c=84.13 Å, β=81.41°. With two molecules in the asymmetric unit, the Matthews coefficient was 3.13 Å3 Da(-1). Initial attempts to solve the structure by molecular-replacement techniques using T4 lysozyme as a search model were successful. The C-terminal OSBP-related domain (OBD) of Osh3 was crystallized by the vapour-diffusion method and the resulting crystal diffracted to 1.5 Å resolution. The crystal was orthorhombic, belonging to space group P2(1)2(1)2(1), with unit-cell parameters a=41.57, b=87.52, c=100.58 Å. With one molecule in the asymmetric unit, the Matthews coefficient was 2.01 Å3 Da(-1). Initial attempts to solve the structure by the single-wavelength anomalous dispersion technique using bromine were successful.

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Year:  2012        PMID: 23192032      PMCID: PMC3509973          DOI: 10.1107/S1744309112042510

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  24 in total

1.  A conserved ER targeting motif in three families of lipid binding proteins and in Opi1p binds VAP.

Authors:  Christopher J R Loewen; Anjana Roy; Timothy P Levine
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

2.  Overlapping functions of the yeast oxysterol-binding protein homologues.

Authors:  C T Beh; L Cool; J Phillips; J Rine
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

3.  Structural mechanism for sterol sensing and transport by OSBP-related proteins.

Authors:  Young Jun Im; Sumana Raychaudhuri; William A Prinz; James H Hurley
Journal:  Nature       Date:  2005-09-01       Impact factor: 49.962

4.  The OSBP-related protein family in humans.

Authors:  M Lehto; S Laitinen; G Chinetti; M Johansson; C Ehnholm; B Staels; E Ikonen; V M Olkkonen
Journal:  J Lipid Res       Date:  2001-08       Impact factor: 5.922

5.  OSBP is a cholesterol-regulated scaffolding protein in control of ERK 1/2 activation.

Authors:  Ping-Yuan Wang; Jian Weng; Richard G W Anderson
Journal:  Science       Date:  2005-03-04       Impact factor: 47.728

6.  Evaluation of macromolecular electron-density map quality using the correlation of local r.m.s. density.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-11

7.  A role for yeast oxysterol-binding protein homologs in endocytosis and in the maintenance of intracellular sterol-lipid distribution.

Authors:  Christopher T Beh; Jasper Rine
Journal:  J Cell Sci       Date:  2004-06-01       Impact factor: 5.285

8.  GPCR engineering yields high-resolution structural insights into beta2-adrenergic receptor function.

Authors:  Daniel M Rosenbaum; Vadim Cherezov; Michael A Hanson; Søren G F Rasmussen; Foon Sun Thian; Tong Sun Kobilka; Hee-Jung Choi; Xiao-Jie Yao; William I Weis; Raymond C Stevens; Brian K Kobilka
Journal:  Science       Date:  2007-10-25       Impact factor: 47.728

9.  Maximum-likelihood density modification.

Authors:  T C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-08

10.  Translocation of oxysterol binding protein to Golgi apparatus triggered by ligand binding.

Authors:  N D Ridgway; P A Dawson; Y K Ho; M S Brown; J L Goldstein
Journal:  J Cell Biol       Date:  1992-01       Impact factor: 10.539

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  2 in total

1.  S92 phosphorylation induces structural changes in the N-terminus domain of human mitochondrial calcium uniporter.

Authors:  Youngjin Lee; Jongseo Park; Gihwan Lee; Sanghwa Yoon; Choon Kee Min; Tae Gyun Kim; Takenori Yamamoto; Do Han Kim; Keun Woo Lee; Soo Hyun Eom
Journal:  Sci Rep       Date:  2020-06-04       Impact factor: 4.379

2.  Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.

Authors:  Youngjin Lee; Choon Kee Min; Tae Gyun Kim; Hong Ki Song; Yunki Lim; Dongwook Kim; Kahee Shin; Moonkyung Kang; Jung Youn Kang; Hyung-Seop Youn; Jung-Gyu Lee; Jun Yop An; Kyoung Ryoung Park; Jia Jia Lim; Ji Hun Kim; Ji Hye Kim; Zee Yong Park; Yeon-Soo Kim; Jimin Wang; Do Han Kim; Soo Hyun Eom
Journal:  EMBO Rep       Date:  2015-09-03       Impact factor: 8.807

  2 in total

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