Literature DB >> 23192029

Crystallization and preliminary X-ray crystallographic analysis of quinolinate phosphoribosyltransferase from porcine kidney in complex with nicotinate mononucleotide.

Hyung-Seop Youn1, Mun-Kyoung Kim, Gil Bu Kang, Tae Gyun Kim, Jun Yop An, Jung-Gyu Lee, Kyoung Ryoung Park, Youngjin Lee, Shin-Ichi Fukuoka, Soo Hyun Eom.   

Abstract

Quinolinate phosphoribosyltransferase (QAPRTase) is a key enzyme in NAD biosynthesis; it catalyzes the formation of nicotinate mononucleotide (NAMN) from quinolinate and 5-phosphoribosyl-1-pyrophosphate. In order to elucidate the mechanism of NAMN biosynthesis, crystals of Sus scrofa QAPRTase (Ss-QAPRTase) purified from porcine kidney in complex with NAMN were obtained and diffraction data were collected and processed to 2.1 Å resolution. The Ss-QAPRTase-NAMN cocrystals belonged to space group P321, with unit-cell parameters a=119.1, b=119.1, c=93.7 Å, γ=120.0°. The Matthews coefficient and the solvent content were estimated as 3.10 Å3 Da(-1) and 60.3%, respectively, assuming the presence of two molecules in the asymmetric unit.

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Year:  2012        PMID: 23192029      PMCID: PMC3509970          DOI: 10.1107/S1744309112040638

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  22 in total

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Journal:  Proteins       Date:  2004-05-15

2.  Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori.

Authors:  Mun-kyoung Kim; Young Jun Im; Jun Hyuck Lee; Soo Hyun Eom
Journal:  Proteins       Date:  2006-04-01

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7.  Comprehensive X-ray structural studies of the quinolinate phosphoribosyl transferase (BNA6) from Saccharomyces cerevisiae.

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8.  Structural and kinetic characterization of quinolinate phosphoribosyltransferase (hQPRTase) from homo sapiens.

Authors:  Huanting Liu; Kerry Woznica; Gemma Catton; Amanda Crawford; Nigel Botting; James H Naismith
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9.  REFMAC5 for the refinement of macromolecular crystal structures.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
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  1 in total

1.  Crystal structure of Sus scrofa quinolinate phosphoribosyltransferase in complex with nicotinate mononucleotide.

Authors:  Hyung-Seop Youn; Mun-Kyoung Kim; Gil Bu Kang; Tae Gyun Kim; Jung-Gyu Lee; Jun Yop An; Kyoung Ryoung Park; Youngjin Lee; Jung Youn Kang; Hye-Eun Song; Inju Park; Chunghee Cho; Shin-Ichi Fukuoka; Soo Hyun Eom
Journal:  PLoS One       Date:  2013-04-23       Impact factor: 3.240

  1 in total

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