Literature DB >> 23192020

Structure of extracellular signal-regulated kinase 2 in complex with ATP and ADP.

Jun Zhang1, Paul Shapiro, Edwin Pozharski.   

Abstract

Extracellular signal-regulated kinases 1 and 2 (ERK1 and ERK2) are members of the mitogen-activated protein (MAP) kinase family. Constitutive activation of the ERK proteins contributes to the development and progression of numerous human tumors. Thus, ERK1 and ERK2 are promising targets for the design and the development of anticancer drugs. The detailed structural analysis of ERK complexed with ATP can provide valuable information for the design of new ligands that can bind in the ATP-binding pocket and inhibit ERK activity. In this study, the structures of apo-form ERK2 and of its complexes with the substrate ATP and the product ADP were determined. Comparison with the structural homolog cyclin-dependent kinase 2 reveals differences in the way that the ATP binding to the protein is mediated by magnesium. Only minor conformational changes are identified that occur upon substrate binding, and these are limited to the active-site residues.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23192020      PMCID: PMC3509961          DOI: 10.1107/S1744309112042972

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  15 in total

Review 1.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

Review 2.  Protein kinases--the major drug targets of the twenty-first century?

Authors:  Philip Cohen
Journal:  Nat Rev Drug Discov       Date:  2002-04       Impact factor: 84.694

3.  Quantitative analysis of ERK2 interactions with substrate proteins: roles for kinase docking domains and activity in determining binding affinity.

Authors:  Kimberly A Burkhard; Fengming Chen; Paul Shapiro
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

4.  Atomic structure of the MAP kinase ERK2 at 2.3 A resolution.

Authors:  F Zhang; A Strand; D Robbins; M H Cobb; E J Goldsmith
Journal:  Nature       Date:  1994-02-24       Impact factor: 49.962

5.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 7.  Switching on kinases: oncogenic activation of BRAF and the PDGFR family.

Authors:  Nick J Dibb; Stephen M Dilworth; Clifford D Mol
Journal:  Nat Rev Cancer       Date:  2004-09       Impact factor: 60.716

8.  Mutation of position 52 in ERK2 creates a nonproductive binding mode for adenosine 5'-triphosphate.

Authors:  M J Robinson; P C Harkins; J Zhang; R Baer; J W Haycock; M H Cobb; E J Goldsmith
Journal:  Biochemistry       Date:  1996-05-07       Impact factor: 3.162

9.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

10.  An introduction to data reduction: space-group determination, scaling and intensity statistics.

Authors:  Philip R Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
View more
  6 in total

1.  Endogenous, regulatory cysteine sulfenylation of ERK kinases in response to proliferative signals.

Authors:  Jeremiah D Keyes; Derek Parsonage; Rama D Yammani; LeAnn C Rogers; Chelsea Kesty; Cristina M Furdui; Kimberly J Nelson; Leslie B Poole
Journal:  Free Radic Biol Med       Date:  2017-08-24       Impact factor: 7.376

2.  Mechanosensitive Conformation of Vinculin Regulates Its Binding to MAPK1.

Authors:  Kiavash Garakani; Hengameh Shams; Mohammad R K Mofrad
Journal:  Biophys J       Date:  2017-05-09       Impact factor: 4.033

3.  Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.

Authors:  Laurel M Pegram; Jennifer C Liddle; Yao Xiao; Maria Hoh; Johannes Rudolph; Dylan B Iverson; Guy P Vigers; Darin Smith; Hailong Zhang; Weiru Wang; John G Moffat; Natalie G Ahn
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-16       Impact factor: 11.205

4.  Co-conserved MAPK features couple D-domain docking groove to distal allosteric sites via the C-terminal flanking tail.

Authors:  Tuan Nguyen; Zheng Ruan; Krishnadev Oruganty; Natarajan Kannan
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

5.  Activation Loop Dynamics Are Coupled to Core Motions in Extracellular Signal-Regulated Kinase-2.

Authors:  Dylan B Iverson; Yao Xiao; David N Jones; Elan Z Eisenmesser; Natalie G Ahn
Journal:  Biochemistry       Date:  2020-07-15       Impact factor: 3.162

6.  Magnesium Elevation Promotes Neuronal Differentiation While Suppressing Glial Differentiation of Primary Cultured Adult Mouse Neural Progenitor Cells through ERK/CREB Activation.

Authors:  Wang Liao; Mujun Jiang; Mei Li; Congli Jin; Songhua Xiao; Shengnuo Fan; Wenli Fang; Yuqiu Zheng; Jun Liu
Journal:  Front Neurosci       Date:  2017-02-23       Impact factor: 4.677

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.