Literature DB >> 23190087

Digging deeper into the field of the small cell lung cancer tumor marker ProGRP: a method for differentiation of its isoforms.

Silje Bøen Torsetnes1, Marianne Sparby Nordlund, Elisabeth Paus, Trine Grønhaug Halvorsen, Léon Reubsaet.   

Abstract

In this paper, we have used a newly developed immunocapture and LC-MS method to demonstrate for the first time the presence of protein isoforms 1 and 3 of the small cell lung cancer (SCLC) marker progastrin-releasing peptide (ProGRP) in sera. In addition, the method allows for indirect determination of the relative presence of the other known isoform of ProGRP, also known as ProGRP isoform 2. This new method is able to determine total ProGRP as a marker in sera at clinically relevant levels and to differentiate between isoforms at the low-pM level through combining selective sample preparation by immunoextraction, tryptic digestion, and separation followed by detection with LC-SRM-MS of the signature peptides, NLLGLIEAK (total ProGRP), LSAPGSQR (ProGRP isoform 1), and DLVDSLLQVLNVK (ProGRP isoform 3), with accuracies ≤ 25% for lower limit of quantification (LLOQ) and precisions ≤ 33%. By analyzing serum samples from four patients diagnosed with SCLC using the here described new and fully validated method, the ability is shown to both determine total ProGRP concentration and to differentiate between ProGRP isoforms 1 and 3 in one single run. Quantification of various ProGRP isoforms in one single run may be helpful for further understanding of the underlying biochemical processes in SCLC and differentiation of small cell lung cancer.

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Year:  2012        PMID: 23190087     DOI: 10.1021/pr300751j

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  8 in total

1.  Immunocapture sample clean-up in determination of low abundant protein biomarkers - a feasibility study of peptide capture by anti-protein antibodies.

Authors:  Maren C S Levernæs; Bassem Farhat; Inger Oulie; Sazan S Abdullah; Elisabeth Paus; Léon Reubsaet; Trine G Halvorsen
Journal:  RSC Adv       Date:  2019-10-29       Impact factor: 4.036

2.  Integrated enzyme reactor and high resolving chromatography in "sub-chip" dimensions for sensitive protein mass spectrometry.

Authors:  Hanne Kolsrud Hustoft; Ole Kristian Brandtzaeg; Magnus Rogeberg; Dorna Misaghian; Silje Bøen Torsetnes; Tyge Greibrokk; Léon Reubsaet; Steven Ray Wilson; Elsa Lundanes
Journal:  Sci Rep       Date:  2013-12-16       Impact factor: 4.379

Review 3.  Lung Cancer Gene Signatures and Clinical Perspectives.

Authors:  Ruprecht Kuner
Journal:  Microarrays (Basel)       Date:  2013-12-13

4.  Automated Protein Biomarker Analysis: on-line extraction of clinical samples by Molecularly Imprinted Polymers.

Authors:  Cecilia Rossetti; Magdalena A Świtnicka-Plak; Trine Grønhaug Halvorsen; Peter A G Cormack; Börje Sellergren; Léon Reubsaet
Journal:  Sci Rep       Date:  2017-03-17       Impact factor: 4.379

Review 5.  Respiratory Proteomics Today: Are Technological Advances for the Identification of Biomarker Signatures Catching up with Their Promise? A Critical Review of the Literature in the Decade 2004-2013.

Authors:  Simona Viglio; Jan Stolk; Paolo Iadarola; Serena Giuliano; Maurizio Luisetti; Roberta Salvini; Marco Fumagalli; Anna Bardoni
Journal:  Proteomes       Date:  2014-01-22

6.  Magnetic Synthetic Receptors for Selective Clean-Up in Protein Biomarker Quantification.

Authors:  Nicholas McKitterick; Frida Braathen; Magdalena A Switnicka-Plak; Peter A G Cormack; Léon Reubsaet; Trine Grønhaug Halvorsen
Journal:  J Proteome Res       Date:  2020-07-20       Impact factor: 4.466

7.  New Antibody-Free Mass Spectrometry-Based Quantification Reveals That C9ORF72 Long Protein Isoform Is Reduced in the Frontal Cortex of Hexanucleotide-Repeat Expansion Carriers.

Authors:  Arthur Viodé; Clémence Fournier; Agnès Camuzat; François Fenaille; Morwena Latouche; Fanny Elahi; Isabelle Le Ber; Christophe Junot; Foudil Lamari; Vincent Anquetil; François Becher
Journal:  Front Neurosci       Date:  2018-08-28       Impact factor: 4.677

Review 8.  Immunocapture strategies in translational proteomics.

Authors:  Claudia Fredolini; Sanna Byström; Elisa Pin; Fredrik Edfors; Davide Tamburro; Maria Jesus Iglesias; Anna Häggmark; Mun-Gwan Hong; Mathias Uhlen; Peter Nilsson; Jochen M Schwenk
Journal:  Expert Rev Proteomics       Date:  2015-11-11       Impact factor: 3.940

  8 in total

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