| Literature DB >> 23185626 |
Olayidé Boussari1, Nicolas Moiroux, Jean Iwaz, Armel Djènontin, Sahabi Bio-Bangana, Vincent Corbel, Noël Fonton, René Ecochard.
Abstract
Vector control is a major step in the process of malaria control and elimination. This requires vector counts and appropriate statistical analyses of these counts. However, vector counts are often overdispersed. A non-parametric mixture of Poisson model (NPMP) is proposed to allow for overdispersion and better describe vector distribution. Mosquito collections using the Human Landing Catches as well as collection of environmental and climatic data were carried out from January to December 2009 in 28 villages in Southern Benin. A NPMP regression model with "village" as random effect is used to test statistical correlations between malaria vectors density and environmental and climatic factors. Furthermore, the villages were ranked using the latent classes derived from the NPMP model. Based on this classification of the villages, the impacts of four vector control strategies implemented in the villages were compared. Vector counts were highly variable and overdispersed with important proportion of zeros (75%). The NPMP model had a good aptitude to predict the observed values and showed that: i) proximity to freshwater body, market gardening, and high levels of rain were associated with high vector density; ii) water conveyance, cattle breeding, vegetation index were associated with low vector density. The 28 villages could then be ranked according to the mean vector number as estimated by the random part of the model after adjustment on all covariates. The NPMP model made it possible to describe the distribution of the vector across the study area. The villages were ranked according to the mean vector density after taking into account the most important covariates. This study demonstrates the necessity and possibility of adapting methods of vector counting and sampling to each setting.Entities:
Mesh:
Year: 2012 PMID: 23185626 PMCID: PMC3503967 DOI: 10.1371/journal.pone.0050452
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Means and standard deviations of the number of mosquitoes collected per site and per night at each of the 28 villages of the study.
Figure 2Mean-variance diagrams of the number of malaria vectors collected per village (Panel A), per mission (Panel B), and per village-mission (Panel C).
Panel D shows a bar diagram of the distribution of mosquito counts at each collection site (the scale of the X-axis was limited to 14). On panels A, B and C: the dotted lines represent a linear link between the means and the variance ( with = 7.4, 6.48 and 5.9 respectively); the curves represent a quadratic link between mean and variance ( with = 4.4, 8.9 and 1.1 respectively).
Parameters and deviance as estimated by the Poisson, ZIP, NPMP, NB and ZINB models.
| Parameters | ||||
| Distribution | Mean (SE) | Proportion (SE) | Dispersion parameter | −2logL |
| Standard Poisson | 0.835 (0.015) | 1 (-) | 13492.470 | |
| Zero-inflated Poisson (ZIP) | 9229.370 | |||
|
| 0 (-) | 0.736 (0.008) | ||
|
| 3.169 (0.062) | 0.264 (0.008) | ||
| Poisson mixture model with 4 latent classes (NPMP) | 7591.700 | |||
|
| 0 (7×10−6) | 0.630 (-) | ||
|
| 0.923 (0.029) | 0.296 (-) | ||
|
| 6.555 (0.161) | 0.070 (-) | ||
|
| 24.480 (1.281) | 0.004 (-) | ||
| Negative Binomial (NB) | 0.835 (0.038) | 1 (-) | 0.156 (0.007) | 7581.856 |
| Zero-inflated negative binomial (ZINB) | 7581.856 | |||
|
| 0 (-) | 3.6×10−6(1.7×10−5) | ||
|
| 0.835 (0.038) | 0.999 (1.7×10−5) | 0.156 (0.007) | |
−2logL: −2 times the log-likelihood
Figure 3Observed and expected proportions of mosquito counts according to Poisson, ZIP, NPMP and NB distributions.
Figure 4Changes in the values of the Bayesian Information Criterion (BIC), the entropy, and the Integrated Complete-data Likelihood (ICL-BIC) according to the number of latent classes.
Estimations of the relationships between mosquito density and various geographical and environmental factors in OKT region according to the conditional NPMP model.
| Level and covariate | Relative Risk (95% CI) |
|
| |
| Distance to a freshwater body (per additional km) | 0.885 (0.871–0.899) |
| Presence of water conveyance (Yes vs. No) | 0.411 (0.348–0.485) |
| Presence of market gardening (Yes vs. No) | 1.146 (1.016–1.292) |
| Presence of cattle (Yes vs. No) | 0.817 (0.700–0.954) |
| Layout of the village (single- vs. multi-cluster) | 0.466 (0.377–0.574) |
| Population density (per additional inhabitant/100 m2) | 1.335 (1.079–1.651) |
| Mean rain quantity over all surveys (per additional mm) | 1.325 (1.292–1.359) |
| Mean number of rainy days over all surveys (per additional day) | 2.148 (1.675–2.754) |
| Mean NDVI (per additional grade) | 0.849 (0.827–0.872) |
|
| |
| Deviation from the mean NDVI of the village (per additional grade) | 0.990 (0.978–1.003) |
| Collection site (outside vs. inside) | 1.182 (1.100–1.270) |
|
| |
| Deviation | 0.993 (0.989–0.997) |
| Deviation | 0.902 (0.827–0.984) |
Difference between the mean value over all surveys and the value at a given survey
Classification of the 28 villages according to the maximum a posteriori probability (MAP) of belonging to each class after adjustment on all other covariates.
| Village | Latent class | Mean number of mosquitoes | Proportionof villages | MAP |
| Hekandji | 1 | 0.050 | 0.036 | 0.992 |
| Aidjedo | 2 | 0.137 | 0.218 | 0.997 |
| Assogbenou | 1 | |||
| Ayidohoue | 0.990 | |||
| Dokanmey | 0.998 | |||
| Hounkponouhoue | 1 | |||
| Abenihoue | 1 | |||
| Adjame | 3 | 0.324 | 0.466 | 1 |
| Amoulehoue | 1 | |||
| Adjahassa | 0.924 | |||
| Kindjitokpa | 1 | |||
| Vidjinnagnimon | 1 | |||
| Guezohoue | 1 | |||
| Hla | 1 | |||
| Agokon | 0.968 | |||
| Dekponhoue | 0.998 | |||
| Lokohoue | 1 | |||
| Todo | 1 | |||
| Wanho | 1 | |||
| Zoume | 0.994 | |||
| Agouako | 4 | 0.713 | 0.280 | 0.775 |
| Hinmadou | 0.925 | |||
| Manguevie | 0.925 | |||
| Satre | 0.925 | |||
| Soko | 0.925 | |||
| Tanto | 0.925 | |||
| Tokoli | 0.925 | |||
| Agadon | 0.925 |