Literature DB >> 23183974

Outer cell surface components essential for Fe(III) oxide reduction by Geobacter metallireducens.

Jessica A Smith1, Derek R Lovley, Pier-Luc Tremblay.   

Abstract

Geobacter species are important Fe(III) reducers in a diversity of soils and sediments. Mechanisms for Fe(III) oxide reduction have been studied in detail in Geobacter sulfurreducens, but a number of the most thoroughly studied outer surface components of G. sulfurreducens, particularly c-type cytochromes, are not well conserved among Geobacter species. In order to identify cellular components potentially important for Fe(III) oxide reduction in Geobacter metallireducens, gene transcript abundance was compared in cells grown on Fe(III) oxide or soluble Fe(III) citrate with whole-genome microarrays. Outer-surface cytochromes were also identified. Deletion of genes for c-type cytochromes that had higher transcript abundance during growth on Fe(III) oxides and/or were detected in the outer-surface protein fraction identified six c-type cytochrome genes, that when deleted removed the capacity for Fe(III) oxide reduction. Several of the c-type cytochromes which were essential for Fe(III) oxide reduction in G. metallireducens have homologs in G. sulfurreducens that are not important for Fe(III) oxide reduction. Other genes essential for Fe(III) oxide reduction included a gene predicted to encode an NHL (Ncl-1-HT2A-Lin-41) repeat-containing protein and a gene potentially involved in pili glycosylation. Genes associated with flagellum-based motility, chemotaxis, and pili had higher transcript abundance during growth on Fe(III) oxide, consistent with the previously proposed importance of these components in Fe(III) oxide reduction. These results demonstrate that there are similarities in extracellular electron transfer between G. metallireducens and G. sulfurreducens but the outer-surface c-type cytochromes involved in Fe(III) oxide reduction are different.

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Year:  2012        PMID: 23183974      PMCID: PMC3568551          DOI: 10.1128/AEM.02954-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  46 in total

1.  MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.

Authors:  Jessica E Butler; Franz Kaufmann; Maddalena V Coppi; Cinthia Núñez; Derek R Lovley
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

2.  Direct exchange of electrons within aggregates of an evolved syntrophic coculture of anaerobic bacteria.

Authors:  Zarath M Summers; Heather E Fogarty; Ching Leang; Ashley E Franks; Nikhil S Malvankar; Derek R Lovley
Journal:  Science       Date:  2010-12-03       Impact factor: 47.728

3.  Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells.

Authors:  Gemma Reguera; Kelly P Nevin; Julie S Nicoll; Sean F Covalla; Trevor L Woodard; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2006-08-25       Impact factor: 4.792

4.  Tunable metallic-like conductivity in microbial nanowire networks.

Authors:  Nikhil S Malvankar; Madeline Vargas; Kelly P Nevin; Ashley E Franks; Ching Leang; Byoung-Chan Kim; Kengo Inoue; Tünde Mester; Sean F Covalla; Jessica P Johnson; Vincent M Rotello; Mark T Tuominen; Derek R Lovley
Journal:  Nat Nanotechnol       Date:  2011-08-07       Impact factor: 39.213

5.  Identification of multicomponent histidine-aspartate phosphorelay system controlling flagellar and motility gene expression in Geobacter species.

Authors:  Toshiyuki Ueki; Ching Leang; Kengo Inoue; Derek R Lovley
Journal:  J Biol Chem       Date:  2012-02-23       Impact factor: 5.157

6.  Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens.

Authors:  Dawn E Holmes; Swades K Chaudhuri; Kelly P Nevin; Teena Mehta; Barbara A Methé; Anna Liu; Joy E Ward; Trevor L Woodard; Jennifer Webster; Derek R Lovley
Journal:  Environ Microbiol       Date:  2006-10       Impact factor: 5.491

7.  Functional characterization of bacterial oligosaccharyltransferases involved in O-linked protein glycosylation.

Authors:  Amirreza Faridmoayer; Messele A Fentabil; Dominic C Mills; John S Klassen; Mario F Feldman
Journal:  J Bacteriol       Date:  2007-09-21       Impact factor: 3.490

8.  Anaerobic benzene oxidation by Geobacter species.

Authors:  Tian Zhang; Timothy S Bain; Kelly P Nevin; Melissa A Barlett; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2012-09-21       Impact factor: 4.792

9.  A genetic system for Geobacter metallireducens: role of the flagellin and pilin in the reduction of Fe(III) oxide.

Authors:  Pier-Luc Tremblay; Muktak Aklujkar; Ching Leang; Kelly P Nevin; Derek Lovley
Journal:  Environ Microbiol Rep       Date:  2011-11-27       Impact factor: 3.541

10.  Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.

Authors:  Kelly P Nevin; Byoung-Chan Kim; Richard H Glaven; Jessica P Johnson; Trevor L Woodard; Barbara A Methé; Raymond J Didonato; Sean F Covalla; Ashley E Franks; Anna Liu; Derek R Lovley
Journal:  PLoS One       Date:  2009-05-20       Impact factor: 3.240

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  31 in total

1.  Mechanisms involved in Fe(III) respiration by the hyperthermophilic archaeon Ferroglobus placidus.

Authors:  Jessica A Smith; Muktak Aklujkar; Carla Risso; Ching Leang; Ludovic Giloteaux; Dawn E Holmes
Journal:  Appl Environ Microbiol       Date:  2015-02-06       Impact factor: 4.792

Review 2.  An evolving view on biogeochemical cycling of iron.

Authors:  Andreas Kappler; Casey Bryce; Muammar Mansor; Ulf Lueder; James M Byrne; Elizabeth D Swanner
Journal:  Nat Rev Microbiol       Date:  2021-02-01       Impact factor: 60.633

3.  Syntrophic growth with direct interspecies electron transfer between pili-free Geobacter species.

Authors:  Xing Liu; Shiyan Zhuo; Christopher Rensing; Shungui Zhou
Journal:  ISME J       Date:  2018-06-06       Impact factor: 10.302

Review 4.  Protein Nanowires: the Electrification of the Microbial World and Maybe Our Own.

Authors:  Derek R Lovley; Dawn E Holmes
Journal:  J Bacteriol       Date:  2020-09-23       Impact factor: 3.490

5.  Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.

Authors:  Jessica A Smith; Pier-Luc Tremblay; Pravin Malla Shrestha; Oona L Snoeyenbos-West; Ashley E Franks; Kelly P Nevin; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

6.  Anaerobic benzene oxidation via phenol in Geobacter metallireducens.

Authors:  Tian Zhang; Pier-Luc Tremblay; Akhilesh Kumar Chaurasia; Jessica A Smith; Timothy S Bain; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2013-10-04       Impact factor: 4.792

7.  Transcriptomic and genetic analysis of direct interspecies electron transfer.

Authors:  Pravin Malla Shrestha; Amelia-Elena Rotaru; Zarath M Summers; Minita Shrestha; Fanghua Liu; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2013-02-01       Impact factor: 4.792

8.  Global transcriptional analysis of Geobacter sulfurreducens under palladium reducing conditions reveals new key cytochromes involved.

Authors:  Alberto Hernández-Eligio; Aurora M Pat-Espadas; Leticia Vega-Alvarado; Manuel Huerta-Amparán; Francisco J Cervantes; Katy Juárez
Journal:  Appl Microbiol Biotechnol       Date:  2020-03-16       Impact factor: 4.813

9.  U(VI) reduction by diverse outer surface c-type cytochromes of Geobacter sulfurreducens.

Authors:  Roberto Orellana; Janet J Leavitt; Luis R Comolli; Roseann Csencsits; Noemie Janot; Kelly A Flanagan; Arianna S Gray; Ching Leang; Mounir Izallalen; Tünde Mester; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2013-08-09       Impact factor: 4.792

10.  Direct interspecies electron transfer between Geobacter metallireducens and Methanosarcina barkeri.

Authors:  Amelia-Elena Rotaru; Pravin Malla Shrestha; Fanghua Liu; Beatrice Markovaite; Shanshan Chen; Kelly P Nevin; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2014-08       Impact factor: 4.792

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