Literature DB >> 23181467

Systems insight into the spore germination of Streptomyces coelicolor.

Eva Strakova1, Jan Bobek, Alice Zikova, Pavel Rehulka, Oldrich Benada, Helena Rehulkova, Olga Kofronova, Jiri Vohradsky.   

Abstract

An example of bacterium, which undergoes a complex development, is the genus of Streptomyces whose importance lies in their wide capacity to produce secondary metabolites, including antibiotics. In this work, a proteomic approach was applied to the systems study of germination as a transition from dormancy to the metabolically active stage. The protein expression levels were examined throughout the germination time course, the kinetics of the accumulated and newly synthesized proteins were clustered, and proteins detected in each group were identified. Altogether, 104 2DE gel images at 13 time points, from dormant state until 5.5 h of growth, were analyzed. The mass spectrometry identified proteins were separated into functional groups and their potential roles during germination were further assessed. The results showed that the full competence of spores to effectively undergo active metabolism is derived from the sporulation step, which facilitates the rapid initiation of global protein expression during the first 10 min of cultivation. Within the first hour, the majority of proteins were synthesized. From this stage, the full capability of regulatory mechanisms to respond to environmental cues is presumed. The obtained results might also provide a data source for further investigations of the process of germination.

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Year:  2012        PMID: 23181467     DOI: 10.1021/pr300980v

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  11 in total

1.  Positive feedback regulation of stgR expression for secondary metabolism in Streptomyces coelicolor.

Authors:  Xu-Ming Mao; Zhi-Hao Sun; Bi-Rong Liang; Zhi-Bin Wang; Wei-Hong Feng; Fang-Liang Huang; Yong-Quan Li
Journal:  J Bacteriol       Date:  2013-03-01       Impact factor: 3.490

Review 2.  Pre-sporulation stages of Streptomyces differentiation: state-of-the-art and future perspectives.

Authors:  Paula Yagüe; Maria T López-García; Beatriz Rioseras; Jesús Sánchez; Angel Manteca
Journal:  FEMS Microbiol Lett       Date:  2013-04-12       Impact factor: 2.742

3.  Inference of sigma factor controlled networks by using numerical modeling applied to microarray time series data of the germinating prokaryote.

Authors:  Eva Strakova; Alice Zikova; Jiri Vohradsky
Journal:  Nucleic Acids Res       Date:  2013-10-23       Impact factor: 16.971

4.  The molecular timeline of a reviving bacterial spore.

Authors:  Lior Sinai; Alex Rosenberg; Yoav Smith; Einat Segev; Sigal Ben-Yehuda
Journal:  Mol Cell       Date:  2015-02-05       Impact factor: 17.970

5.  Characterization of SCO4439, a D-alanyl-D-alanine carboxypeptidase involved in spore cell wall maturation, resistance, and germination in Streptomyces coelicolor.

Authors:  Beatriz Rioseras; Paula Yagüe; María Teresa López-García; Nathaly Gonzalez-Quiñonez; Elisa Binda; Flavia Marinelli; Angel Manteca
Journal:  Sci Rep       Date:  2016-02-12       Impact factor: 4.379

Review 6.  A Waking Review: Old and Novel Insights into the Spore Germination in Streptomyces.

Authors:  Jan Bobek; Klára Šmídová; Matouš Čihák
Journal:  Front Microbiol       Date:  2017-11-13       Impact factor: 5.640

7.  Secondary Metabolites Produced during the Germination of Streptomyces coelicolor.

Authors:  Matouš Čihák; Zdeněk Kameník; Klára Šmídová; Natalie Bergman; Oldřich Benada; Olga Kofroňová; Kateřina Petříčková; Jan Bobek
Journal:  Front Microbiol       Date:  2017-12-13       Impact factor: 5.640

8.  Transcriptomic analysis of Streptomyces coelicolor differentiation in solid sporulating cultures: first compartmentalized and second multinucleated mycelia have different and distinctive transcriptomes.

Authors:  Paula Yagüe; Antonio Rodríguez-García; María T López-García; Juan F Martín; Beatriz Rioseras; Jesús Sánchez; Angel Manteca
Journal:  PLoS One       Date:  2013-03-28       Impact factor: 3.240

9.  Global features of gene expression on the proteome and transcriptome levels in S. coelicolor during germination.

Authors:  Eva Strakova; Jan Bobek; Alice Zikova; Jiri Vohradsky
Journal:  PLoS One       Date:  2013-09-09       Impact factor: 3.240

10.  RNase III-Binding-mRNAs Revealed Novel Complementary Transcripts in Streptomyces.

Authors:  Dita Šetinová; Klára Šmídová; Pavel Pohl; Inesa Musić; Jan Bobek
Journal:  Front Microbiol       Date:  2018-01-15       Impact factor: 5.640

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