Literature DB >> 23180139

Modeling the calcium sequestration system in isolated guinea pig cardiac mitochondria.

Jason N Bazil1, Christoph A Blomeyer, Ranjan K Pradhan, Amadou K S Camara, Ranjan K Dash.   

Abstract

Under high Ca(2+) load conditions, Ca(2+) concentrations in the extra-mitochondrial and mitochondrial compartments do not display reciprocal dynamics. This is due to a paradoxical increase in the mitochondrial Ca(2+) buffering power as the Ca(2+) load increases. Here we develop and characterize a mechanism of the mitochondrial Ca(2+) sequestration system using an experimental data set from isolated guinea pig cardiac mitochondria. The proposed mechanism elucidates this phenomenon and others in a mathematical framework and is integrated into a previously corroborated model of oxidative phosphorylation including the Na(+)/Ca(2+) cycle. The integrated model reproduces the Ca(2+) dynamics observed in both compartments of the isolated mitochondria respiring on pyruvate after a bolus of CaCl2 followed by ruthenium red and a bolus of NaCl. The model reveals why changes in mitochondrial Ca(2+) concentration of Ca(2+) loaded mitochondria appear significantly mitigated relative to the corresponding extra-mitochondrial Ca(2+) concentration changes after Ca(2+) efflux is initiated. The integrated model was corroborated by simulating the set-point phenomenon. The computational results support the conclusion that the Ca(2+) sequestration system is composed of at least two classes of Ca(2+) buffers. The first class represents prototypical Ca(2+) buffering, and the second class encompasses the complex binding events associated with the formation of amorphous calcium phosphate. With the Ca(2+) sequestration system in mitochondria more precisely defined, computer simulations can aid in the development of innovative therapeutics aimed at addressing the myriad of complications that arise due to mitochondrial Ca(2+) overload.

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Year:  2012        PMID: 23180139      PMCID: PMC3615037          DOI: 10.1007/s10863-012-9488-2

Source DB:  PubMed          Journal:  J Bioenerg Biomembr        ISSN: 0145-479X            Impact factor:   2.945


  57 in total

1.  A biophysically based mathematical model for the kinetics of mitochondrial Na+-Ca2+ antiporter.

Authors:  Ranjan K Pradhan; Daniel A Beard; Ranjan K Dash
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2.  A bioenergetic model of the mitochondrial population undergoing permeability transition.

Authors:  Jason N Bazil; Gregery T Buzzard; Ann E Rundell
Journal:  J Theor Biol       Date:  2010-06-09       Impact factor: 2.691

3.  Multiple ion binding equilibria, reaction kinetics, and thermodynamics in dynamic models of biochemical pathways.

Authors:  Kalyan C Vinnakota; Fan Wu; Martin J Kushmerick; Daniel A Beard
Journal:  Methods Enzymol       Date:  2009       Impact factor: 1.600

4.  Phosphate-independent calcium efflux from liver mitochondria.

Authors:  F Zoccarato; D G Nicholls
Journal:  FEBS Lett       Date:  1981-06-15       Impact factor: 4.124

Review 5.  Mitochondrial Ca2+ sequestration and precipitation revisited.

Authors:  Christos Chinopoulos; Vera Adam-Vizi
Journal:  FEBS J       Date:  2010-07-26       Impact factor: 5.542

6.  Mitochondrial free [Ca2+] increases during ATP/ADP antiport and ADP phosphorylation: exploration of mechanisms.

Authors:  Johan Haumann; Ranjan K Dash; David F Stowe; Age D Boelens; Daniel A Beard; Amadou K S Camara
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

7.  A re-evaluation of the role of matrix acidification in uncoupler-induced Ca2+ release from mitochondria.

Authors:  Szilvia Vajda; Miklós Mándi; Csaba Konràd; Gergely Kiss; Attila Ambrus; Vera Adam-Vizi; Christos Chinopoulos
Journal:  FEBS J       Date:  2009-05       Impact factor: 5.542

8.  In vitro modeling of matrix vesicle nucleation: synergistic stimulation of mineral formation by annexin A5 and phosphatidylserine.

Authors:  Brian R Genge; Licia N Y Wu; Roy E Wuthier
Journal:  J Biol Chem       Date:  2007-07-05       Impact factor: 5.157

9.  A minimal model for the mitochondrial rapid mode of Ca²+ uptake mechanism.

Authors:  Jason N Bazil; Ranjan K Dash
Journal:  PLoS One       Date:  2011-06-23       Impact factor: 3.240

10.  Modeling mitochondrial bioenergetics with integrated volume dynamics.

Authors:  Jason N Bazil; Gregery T Buzzard; Ann E Rundell
Journal:  PLoS Comput Biol       Date:  2010-01-01       Impact factor: 4.475

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  18 in total

1.  Calcium overload decreases net free radical emission in cardiac mitochondria.

Authors:  Quynh V Duong; Adrianna Hoffman; Katie Zhong; Maria J Dessinger; Yizhu Zhang; Jason N Bazil
Journal:  Mitochondrion       Date:  2020-01-23       Impact factor: 4.160

Review 2.  Mitochondrial calcium and the regulation of metabolism in the heart.

Authors:  George S B Williams; Liron Boyman; W Jonathan Lederer
Journal:  J Mol Cell Cardiol       Date:  2014-11-07       Impact factor: 5.000

Review 3.  Different approaches to modeling analysis of mitochondrial swelling.

Authors:  Sabzali Javadov; Xavier Chapa-Dubocq; Vladimir Makarov
Journal:  Mitochondrion       Date:  2017-08-10       Impact factor: 4.160

Review 4.  A controversial issue: Can mitochondria modulate cytosolic calcium and contraction of skeletal muscle fibers?

Authors:  Carlo Reggiani; Lorenzo Marcucci
Journal:  J Gen Physiol       Date:  2022-07-18       Impact factor: 4.000

5.  Crosstalk between adenine nucleotide transporter and mitochondrial swelling: experimental and computational approaches.

Authors:  Xavier R Chapa-Dubocq; Jorge F Garcia-Baez; Jason N Bazil; Sabzali Javadov
Journal:  Cell Biol Toxicol       Date:  2022-05-24       Impact factor: 6.819

6.  Dynamic buffering of mitochondrial Ca2+ during Ca2+ uptake and Na+-induced Ca2+ release.

Authors:  Christoph A Blomeyer; Jason N Bazil; David F Stowe; Ranjan K Pradhan; Ranjan K Dash; Amadou K S Camara
Journal:  J Bioenerg Biomembr       Date:  2012-12-07       Impact factor: 2.945

7.  Contribution of inorganic polyphosphate towards regulation of mitochondrial free calcium.

Authors:  M E Solesio; L Demirkhanyan; E Zakharian; E V Pavlov
Journal:  Biochim Biophys Acta       Date:  2016-03-16

8.  Computational analysis of Ca2+ dynamics in isolated cardiac mitochondria predicts two distinct modes of Ca2+ uptake.

Authors:  Shivendra G Tewari; Amadou K S Camara; David F Stowe; Ranjan K Dash
Journal:  J Physiol       Date:  2014-03-03       Impact factor: 5.182

9.  Mg(2+) differentially regulates two modes of mitochondrial Ca(2+) uptake in isolated cardiac mitochondria: implications for mitochondrial Ca(2+) sequestration.

Authors:  Christoph A Blomeyer; Jason N Bazil; David F Stowe; Ranjan K Dash; Amadou K S Camara
Journal:  J Bioenerg Biomembr       Date:  2016-01-27       Impact factor: 2.945

10.  A Spatiotemporal Ventricular Myocyte Model Incorporating Mitochondrial Calcium Cycling.

Authors:  Zhen Song; Lai-Hua Xie; James N Weiss; Zhilin Qu
Journal:  Biophys J       Date:  2019-09-12       Impact factor: 4.033

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