| Literature DB >> 23179634 |
Kerri N Smith1, Sarah J Halfyard, Edward S Yaskowiak, Kathryn L Shultz, Wesley G Beamer, Ann M Dorward.
Abstract
The spontaneous development of juvenile-onset, ovarian granulosa cell (GC) tumors in the SWR/Bm (SWR) inbred mouse strain is a model for juvenile-type GC tumors that appear in infants and young girls. GC tumor susceptibility is supported by multiple Granulosa cell tumor (Gct) loci, but the Gct1 locus on Chr 4 derived from SWR strain background is fundamental for GC tumor development and uniquely responsive to the androgenic precursor dehydroepiandrosterone (DHEA). To resolve the location of Gct1 independently from other susceptibility loci, Gct1 was isolated in a congenic strain that replaces the distal segment of Chr 4 in SWR mice with a 47 × 10(6)-bp genomic segment from the Castaneus/Ei (CAST) strain. SWR females homozygous for the CAST donor segment were confirmed to be resistant to DHEA- and testosterone-induced GC tumorigenesis, indicating successful exchange of CAST alleles (Gct1 ( CA )) for SWR alleles (Gct1 ( SW )) at this tumor susceptibility locus. A series of nested, overlapping, congenic sublines was created to fine-map Gct1 based on GC tumor susceptibility under the influence of pubertal DHEA treatment. Twelve informative lines have resolved the Gct1 locus to a 1.31 × 10(6)-bp interval on mouse Chr 4, a region orthologous to human Chr 1p36.22.Entities:
Mesh:
Substances:
Year: 2012 PMID: 23179634 PMCID: PMC3560948 DOI: 10.1007/s00335-012-9439-6
Source DB: PubMed Journal: Mamm Genome ISSN: 0938-8990 Impact factor: 2.957
Granulosa cell tumor incidence in SWR and Line 4-T female mice treated with testosterone or DHEA at puberty
| Strain | Testosterone | DHEA |
|---|---|---|
| SWR | 21/121 (17 %)a | 9/51 (18 %) |
| Line 4-T | 0/50 (0 %) | 0/52 (0 %) |
a0.1 % testosterone diet supplement (Beamer et al. 1993)
Fig. 1Haplotypes and GC tumor susceptibility in SWR.SJL-X.CAST founder and congenic subline females. Females from the SWR.SJL-X.CAST congenic sublines 4-7 through 4-12 have significantly increased GC tumor incidence compared with individuals from line 4-T and lines 4-1 through 4-6 (P < 0.0001). Tumor-susceptible strains share common regions of SWR genetic background between markers rs27633106 and D4kns1, for a minimal 1.31 × 106-bp genetic interval containing Gct1 that is defined by line 4-10 at the proximal boundary and lines 4-5 and 4-6 at the distal boundary. Line 4-7 was found to be heterozygous for SWR and CAST alleles in the region between markers D4Mit70 and D4Mit179 following phenotyping. However, the heterozygous region lies outside of the Gct1 interval and does not influence tumorigenesis. Mb 106-bp
Identity and features of the genetic determinants within the Gct1 interval
| Genea | Description | Gene ontology | Location on chr 4 (bp) | Strand | Gene type | No. unique transcripts |
|---|---|---|---|---|---|---|
|
| Dehydrogenase/reductase (SDR family) member 3 | Oxidoreductase activity | 144,482,730 | + | PC | 8 |
|
| Vacuolar protein sorting 13 D (yeast) | ND | 144,562,529 | − | PC | 10 |
|
| Tumor necrosis factor receptor superfamily, member 1b | TNF receptor | 144,803,366 | − | PC | 2 |
|
| Tumor necrosis factor receptor superfamily, member 8 | TNF receptor | 144,857,040 | − | PC | 2 |
|
| Predicted gene 13227 | ND | 145,000,148 | + | NPT | 2 |
|
| Predicted gene 13225 | ND | 145,100,662 | + | PC | 4 |
|
| Predicted gene 13242 | ND | 145,104,787 | + | PC | 3 |
|
| Predicted gene 13212 | ND | 145,175,069 | + | PC | 3 |
|
| Predicted gene 17609 | ND | 145,191,866 | − | LINC | 1 |
|
| Predicted gene 13236 | ND | 145,352,832 | + | LINC | 1 |
|
| – | ND | 145,454,975 | + | NMI | 1 |
|
| Predicted gene 13235 | ND | 145,458,697 | + | PC | 2 |
|
| Predicted gene 13248 | ND | 145,539,879 | − | PC | 2 |
|
| RIKEN cDNA 1700095A21Rik gene | ND | 145,651,166 | + | AS | 1 |
|
| Predicted gene 13247 | ND | 145,658,647 | − | PC | 2 |
|
| Predicted gene 17565 | ND | 145,686,275 | + | LINC | 1 |
AS novel antisense, LINC lincRNA, PC protein coding, ND not determined, NMI novel miRNA, NPT novel processed transcript, + forward, − reverse
aExcluded from this list are the 23 known pseudogenes present within the Gct1 interval