Literature DB >> 23179011

Nano-swimmers in biological membranes and propulsion hydrodynamics in two dimensions.

Mu-Jie Huang1, Hsuan-Yi Chen, Alexander S Mikhailov.   

Abstract

Active protein inclusions in biological membranes can represent nano-swimmers and propel themselves in lipid bilayers. A simple model of an active inclusion with three particles (domains) connected by variable elastic links is considered. First, the membrane is modeled as a two-dimensional viscous fluid and propulsion behavior in two dimensions is examined. After that, an example of a microscopic dynamical simulation is presented, where the lipid bilayer structure of the membrane is resolved and the solvent effects are included by multiparticle collision dynamics. Statistical analysis of data reveals ballistic motion of the swimmer, in contrast to the classical diffusion behavior found in the absence of active transitions between the states.

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Year:  2012        PMID: 23179011     DOI: 10.1140/epje/i2012-12119-5

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  22 in total

1.  Two-component fluid membranes near repulsive walls: Linearized hydrodynamics of equilibrium and nonequilibrium states.

Authors:  Sumithra Sankararaman; Gautam I Menon; P B Sunil Kumar
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-09-27

2.  Self-propulsion at low Reynolds number.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-05-18       Impact factor: 9.161

3.  Video imaging of walking myosin V by high-speed atomic force microscopy.

Authors:  Noriyuki Kodera; Daisuke Yamamoto; Ryoki Ishikawa; Toshio Ando
Journal:  Nature       Date:  2010-10-10       Impact factor: 49.962

4.  Mechanical response of a small swimmer driven by conformational transitions.

Authors:  Ramin Golestanian; Armand Ajdari
Journal:  Phys Rev Lett       Date:  2008-01-22       Impact factor: 9.161

5.  Hydrodynamic interaction between two swimmers at low Reynolds number.

Authors:  C M Pooley; G P Alexander; J M Yeomans
Journal:  Phys Rev Lett       Date:  2007-11-28       Impact factor: 9.161

6.  Mesoscale modeling of molecular machines: cyclic dynamics and hydrodynamical fluctuations.

Authors:  Andrew Cressman; Yuichi Togashi; Alexander S Mikhailov; Raymond Kapral
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-05-07

7.  The cell as a collection of protein machines: preparing the next generation of molecular biologists.

Authors:  B Alberts
Journal:  Cell       Date:  1998-02-06       Impact factor: 41.582

8.  Dynamics of biomembranes with active multiple-state inclusions.

Authors:  Hsuan-Yi Chen; Alexander S Mikhailov
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-03-01

9.  Optimal stroke patterns for Purcell's three-link swimmer.

Authors:  Daniel Tam; A E Hosoi
Journal:  Phys Rev Lett       Date:  2007-02-09       Impact factor: 9.161

10.  Lateral mobility of proteins in liquid membranes revisited.

Authors:  Y Gambin; R Lopez-Esparza; M Reffay; E Sierecki; N S Gov; M Genest; R S Hodges; W Urbach
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-06       Impact factor: 11.205

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  3 in total

1.  Active matter.

Authors:  Ramin Golestanian; Sriram Ramaswamy
Journal:  Eur Phys J E Soft Matter       Date:  2013-06-28       Impact factor: 1.890

2.  Hydrodynamic collective effects of active protein machines in solution and lipid bilayers.

Authors:  Alexander S Mikhailov; Raymond Kapral
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

3.  Simulating squirmers with multiparticle collision dynamics.

Authors:  Andreas Zöttl; Holger Stark
Journal:  Eur Phys J E Soft Matter       Date:  2018-05-15       Impact factor: 1.890

  3 in total

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