Literature DB >> 23176629

Conformational dynamics in human neuroglobin: effect of His64, Val68, and Cys120 on ligand migration.

Luisana Astudillo1, Sophie Bernad, Valérie Derrien, Pierre Sebban, Jaroslava Miksovska.   

Abstract

Neuroglobin belongs to the family of hexacoordinate hemoglobins and has been implicated in the protection of neuronal tissue under hypoxic and ischemic conditions. Here we present transient absorption and photoacoustic calorimetry studies of CO photodissociation and bimolecular rebinding to neuroglobin focusing on the ligand migration process and the role of distal pocket residues (His64 and Val68) and two Cys residues (Cys55 and Cys120). Our results indicate that His64 has a minor impact on the migration of CO between the distal heme pocket and protein exterior, whereas the Val68 side chain regulates the transition of the photodissociated ligand between the distal pocket and internal hydrophobic cavities, which is evident from the increased geminate quantum yield in this mutated protein (Φ(gem) = 0.32 for WT and His64Gln, and Φ(gem) = 0.85 for Val68Phe). The interface between helix G and the A-B loop provides an escape pathway for the photodissociated ligand, which is evident from a decrease in the reaction enthalpy for the transition between the CO-bound hNgb and five-coordinate hNgb in the Cys120Ser mutant (ΔH = -3 ± 4 kcal mol(-1)) compared to that of the WT protein (ΔH = 20 ± 4 kcal mol(-1)). The extensive electrostatic/hydrogen binding network that includes heme propionate groups, Lys67, His64, and Tyr44 not only restricts the heme binding but also modulates the energetics of binding of CO to the five-coordinate hNgb as substitution of His64 with Gln leads to an endothermic association of CO with the five-coordinate hNgb (ΔH = 6 ± 3 kcal mol(-1)).

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Year:  2012        PMID: 23176629     DOI: 10.1021/bi301016u

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Mapping Hydrophobic Tunnels and Cavities in Neuroglobin with Noble Gas under Pressure.

Authors:  Nathalie Colloc'h; Philippe Carpentier; Laura C Montemiglio; Beatrice Vallone; Thierry Prangé
Journal:  Biophys J       Date:  2017-11-03       Impact factor: 4.033

2.  Impact of A90P, F106L and H64V mutations on neuroglobin stability and ligand binding kinetics.

Authors:  E André; V Derrien; P Sebban; N Assrir; E Lescop; S Bernad
Journal:  J Biol Inorg Chem       Date:  2018-10-25       Impact factor: 3.358

3.  Exploring the mechanisms of the reductase activity of neuroglobin by site-directed mutagenesis of the heme distal pocket.

Authors:  Jesús Tejero; Courtney E Sparacino-Watkins; Venkata Ragireddy; Sheila Frizzell; Mark T Gladwin
Journal:  Biochemistry       Date:  2015-01-16       Impact factor: 3.162

4.  A possible mechanism for redox control of human neuroglobin activity.

Authors:  Alexander N Morozov; James P Roach; Margarita Kotzer; David C Chatfield
Journal:  J Chem Inf Model       Date:  2014-06-19       Impact factor: 4.956

5.  Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography.

Authors:  Nathalie Colloc'h; Sophie Sacquin-Mora; Giovanna Avella; Anne-Claire Dhaussy; Thierry Prangé; Beatrice Vallone; Eric Girard
Journal:  Sci Rep       Date:  2017-05-12       Impact factor: 4.379

6.  Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.

Authors:  Chiara Ardiccioni; Alessandro Arcovito; Stefano Della Longa; Peter van der Linden; Dominique Bourgeois; Martin Weik; Linda Celeste Montemiglio; Carmelinda Savino; Giovanna Avella; Cécile Exertier; Philippe Carpentier; Thierry Prangé; Maurizio Brunori; Nathalie Colloc'h; Beatrice Vallone
Journal:  IUCrJ       Date:  2019-07-10       Impact factor: 4.769

7.  Enhancement of protein stability by an additional disulfide bond designed in human neuroglobin.

Authors:  Hai-Xiao Liu; Lianzhi Li; Xin-Zhi Yang; Chuan-Wan Wei; Hui-Min Cheng; Shu-Qin Gao; Ge-Bo Wen; Ying-Wu Lin
Journal:  RSC Adv       Date:  2019-01-31       Impact factor: 4.036

  7 in total

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