Literature DB >> 23175791

Specific and reversible DNA-directed self-assembly of oil-in-water emulsion droplets.

Maik Hadorn1, Eva Boenzli, Kristian T Sørensen, Harold Fellermann, Peter Eggenberger Hotz, Martin M Hanczyc.   

Abstract

Higher-order structures that originate from the specific and reversible DNA-directed self-assembly of microscopic building blocks hold great promise for future technologies. Here, we functionalized biotinylated soft colloid oil-in-water emulsion droplets with biotinylated single-stranded DNA oligonucleotides using streptavidin as an intermediary linker. We show the components of this modular linking system to be stable and to induce sequence-specific aggregation of binary mixtures of emulsion droplets. Three length scales were thereby involved: nanoscale DNA base pairing linking microscopic building blocks resulted in macroscopic aggregates visible to the naked eye. The aggregation process was reversible by changing the temperature and electrolyte concentration and by the addition of competing oligonucleotides. The system was reset and reused by subsequent refunctionalization of the emulsion droplets. DNA-directed self-assembly of oil-in-water emulsion droplets, therefore, offers a solid basis for programmable and recyclable soft materials that undergo structural rearrangements on demand and that range in application from information technology to medicine.

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Year:  2012        PMID: 23175791      PMCID: PMC3528593          DOI: 10.1073/pnas.1214386109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Self-assembly at all scales.

Authors:  George M Whitesides; Bartosz Grzybowski
Journal:  Science       Date:  2002-03-29       Impact factor: 47.728

2.  Coulomb blockage of hybridization in two-dimensional DNA arrays.

Authors:  Arnold Vainrub; B Montgomery Pettitt
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-10-17

3.  The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures.

Authors:  Anders Holmberg; Anna Blomstergren; Olof Nord; Morten Lukacs; Joakim Lundeberg; Mathias Uhlén
Journal:  Electrophoresis       Date:  2005-02       Impact factor: 3.535

4.  Specific binding of different vesicle populations by the hybridization of membrane-anchored DNA.

Authors:  Paul A Beales; T Kyle Vanderlick
Journal:  J Phys Chem A       Date:  2007-11-13       Impact factor: 2.781

5.  Simple quantitative model for the reversible association of DNA coated colloids.

Authors:  Rémi Dreyfus; Mirjam E Leunissen; Roujie Sha; Alexei V Tkachenko; Nadrian C Seeman; David J Pine; Paul M Chaikin
Journal:  Phys Rev Lett       Date:  2009-01-27       Impact factor: 9.161

6.  Insertion of poly(ethylene glycol) derivatized phospholipid into pre-formed liposomes results in prolonged in vivo circulation time.

Authors:  P S Uster; T M Allen; B E Daniel; C J Mendez; M S Newman; G Z Zhu
Journal:  FEBS Lett       Date:  1996-05-20       Impact factor: 4.124

7.  Structure of fully hydrated fluid phase lipid bilayers with monounsaturated chains.

Authors:  Norbert Kucerka; Stephanie Tristram-Nagle; John F Nagle
Journal:  J Membr Biol       Date:  2006-04-08       Impact factor: 1.843

8.  DNA-mediated self-assembly of artificial vesicles.

Authors:  Maik Hadorn; Peter Eggenberger Hotz
Journal:  PLoS One       Date:  2010-03-26       Impact factor: 3.240

9.  Fatty acid chemistry at the oil-water interface: self-propelled oil droplets.

Authors:  Martin M Hanczyc; Taro Toyota; Takashi Ikegami; Norman Packard; Tadashi Sugawara
Journal:  J Am Chem Soc       Date:  2007-07-06       Impact factor: 15.419

10.  A quantitative analytical method to test for salt effects on giant unilamellar vesicles.

Authors:  Maik Hadorn; Eva Boenzli; Peter Eggenberger Hotz
Journal:  Sci Rep       Date:  2011-11-24       Impact factor: 4.379

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  13 in total

1.  Programming chemistry in DNA-addressable bioreactors.

Authors:  Harold Fellermann; Luca Cardelli
Journal:  J R Soc Interface       Date:  2014-10-06       Impact factor: 4.118

2.  Photo-printing of faceted DNA patchy particles.

Authors:  Jairo A Diaz A; Joon Suk Oh; Gi-Ra Yi; David J Pine
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-08       Impact factor: 11.205

3.  Enhanced nucleic acid amplification with blood in situ by wire-guided droplet manipulation (WDM).

Authors:  Dustin K Harshman; Roberto Reyes; Tu San Park; David J You; Jae-Young Song; Jeong-Yeol Yoon
Journal:  Biosens Bioelectron       Date:  2013-09-27       Impact factor: 10.618

4.  Volume and porosity thermal regulation in lipid mesophases by coupling mobile ligands to soft membranes.

Authors:  Lucia Parolini; Bortolo M Mognetti; Jurij Kotar; Erika Eiser; Pietro Cicuta; Lorenzo Di Michele
Journal:  Nat Commun       Date:  2015-01-07       Impact factor: 14.919

5.  The MATCHIT automaton: exploiting compartmentalization for the synthesis of branched polymers.

Authors:  Mathias S Weyland; Harold Fellermann; Maik Hadorn; Daniel Sorek; Doron Lancet; Steen Rasmussen; Rudolf M Füchslin
Journal:  Comput Math Methods Med       Date:  2013-12-31       Impact factor: 2.238

6.  On-demand droplet fusion: a strategy for stimulus-responsive biosensing in solution.

Authors:  Praveena Mohan; Patrick S Noonan; Matthew A Nakatsuka; Andrew P Goodwin
Journal:  Langmuir       Date:  2014-10-09       Impact factor: 3.882

Review 7.  Droplets: unconventional protocell model with life-like dynamics and room to grow.

Authors:  Martin M Hanczyc
Journal:  Life (Basel)       Date:  2014-12-17

8.  Kinetic control of the coverage of oil droplets by DNA-functionalized colloids.

Authors:  Darshana Joshi; Dylan Bargteil; Alessio Caciagli; Jerome Burelbach; Zhongyang Xing; André S Nunes; Diogo E P Pinto; Nuno A M Araújo; Jasna Brujic; Erika Eiser
Journal:  Sci Adv       Date:  2016-08-05       Impact factor: 14.136

9.  Rich complex behaviour of self-assembled nanoparticles far from equilibrium.

Authors:  Serim Ilday; Ghaith Makey; Gursoy B Akguc; Özgün Yavuz; Onur Tokel; Ihor Pavlov; Oguz Gülseren; F Ömer Ilday
Journal:  Nat Commun       Date:  2017-04-26       Impact factor: 14.919

10.  Evolution of oil droplets in a chemorobotic platform.

Authors:  Juan Manuel Parrilla Gutierrez; Trevor Hinkley; James Ward Taylor; Kliment Yanev; Leroy Cronin
Journal:  Nat Commun       Date:  2014-12-08       Impact factor: 14.919

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