Literature DB >> 23175785

A switch between DNA polymerases δ and λ promotes error-free bypass of 8-oxo-G lesions.

Enni Markkanen1, Benoît Castrec, Giuseppe Villani, Ulrich Hübscher.   

Abstract

7,8-Dihydro-8-oxoguanine (8-oxo-G) is a highly abundant and mutagenic lesion. Replicative DNA polymerases (pols) are slowed down at 8-oxo-G and insert both correct cytosine (C) and incorrect adenine (A) opposite 8-oxo-G, but they preferentially extend A:8-oxo-G mispairs. Nevertheless, 8-oxo-G bypass is fairly accurate in vivo. Thus, the question how correct bypass of 8-oxo-G lesions is accomplished despite the poor extension of C:8-oxo-G base pairs by replicative pols remains unanswered. Here we show that replicative pol δ pauses in front of 8-oxo-G and displays difficulties extending from correct C:8-oxo-G in contrast to extension from incorrect A:8-oxo-G. This leads to stalling of pol δ at 8-oxo-G after incorporation of correct C. This stalling at C:8-oxo-G can be overcome by a switch from pol δ to pols λ, β, or η, all of which are able to assist pol δ in 8-oxo-G bypass by translesion synthesis (TLS). Importantly, however, only pol λ selectively catalyzes the correct TLS past 8-oxo-G, whereas pols β and η show no selectivity and even preferentially enhance incorrect TLS. The selectivity of pol λ to promote the correct bypass depends on its N-terminal domain. Furthermore, pol λ(-/-) mouse embryonic fibroblast extracts display reduced 8-oxo-G TLS. Finally, the correct bypass of 8-oxo-G in gapped plasmids in mouse embryonic fibroblasts and HeLa cells is promoted in the presence of pol λ. Our findings suggest that even though 8-oxo-G is not a blocking lesion per se, correct replication over 8-oxo-G is promoted by a pol switch between pols δ and λ.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23175785      PMCID: PMC3528542          DOI: 10.1073/pnas.1211532109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Base-excision repair of oxidative DNA damage.

Authors:  Sheila S David; Valerie L O'Shea; Sucharita Kundu
Journal:  Nature       Date:  2007-06-21       Impact factor: 49.962

2.  Repair and mutagenic potency of 8-oxoG:A and 8-oxoG:C base pairs in mammalian cells.

Authors:  F Le Page; A Guy; J Cadet; A Sarasin; A Gentil
Journal:  Nucleic Acids Res       Date:  1998-03-01       Impact factor: 16.971

3.  Proliferating cell nuclear antigen promotes DNA synthesis past template lesions by mammalian DNA polymerase delta.

Authors:  D J Mozzherin; S Shibutani; C K Tan; K M Downey; P A Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

4.  Translesion synthesis of 7,8-dihydro-8-oxo-2'-deoxyguanosine by DNA polymerase eta in vivo.

Authors:  Dong-Hyun Lee; Gerd P Pfeifer
Journal:  Mutat Res       Date:  2008-02-15       Impact factor: 2.433

5.  Replication protein A and proliferating cell nuclear antigen coordinate DNA polymerase selection in 8-oxo-guanine repair.

Authors:  Giovanni Maga; Emmanuele Crespan; Ursula Wimmer; Barbara van Loon; Alessandra Amoroso; Chiara Mondello; Cristina Belgiovine; Elena Ferrari; Giada Locatelli; Giuseppe Villani; Ulrich Hübscher
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-22       Impact factor: 11.205

6.  Human DNA polymerase lambda is a proficient extender of primer ends paired to 7,8-dihydro-8-oxoguanine.

Authors:  Angel J Picher; Luis Blanco
Journal:  DNA Repair (Amst)       Date:  2007-08-07

7.  8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins.

Authors:  Giovanni Maga; Giuseppe Villani; Emmanuele Crespan; Ursula Wimmer; Elena Ferrari; Barbara Bertocci; Ulrich Hübscher
Journal:  Nature       Date:  2007-05-16       Impact factor: 49.962

8.  Patterns of somatic mutation in human cancer genomes.

Authors:  Christopher Greenman; Philip Stephens; Raffaella Smith; Gillian L Dalgliesh; Christopher Hunter; Graham Bignell; Helen Davies; Jon Teague; Adam Butler; Claire Stevens; Sarah Edkins; Sarah O'Meara; Imre Vastrik; Esther E Schmidt; Tim Avis; Syd Barthorpe; Gurpreet Bhamra; Gemma Buck; Bhudipa Choudhury; Jody Clements; Jennifer Cole; Ed Dicks; Simon Forbes; Kris Gray; Kelly Halliday; Rachel Harrison; Katy Hills; Jon Hinton; Andy Jenkinson; David Jones; Andy Menzies; Tatiana Mironenko; Janet Perry; Keiran Raine; Dave Richardson; Rebecca Shepherd; Alexandra Small; Calli Tofts; Jennifer Varian; Tony Webb; Sofie West; Sara Widaa; Andy Yates; Daniel P Cahill; David N Louis; Peter Goldstraw; Andrew G Nicholson; Francis Brasseur; Leendert Looijenga; Barbara L Weber; Yoke-Eng Chiew; Anna DeFazio; Mel F Greaves; Anthony R Green; Peter Campbell; Ewan Birney; Douglas F Easton; Georgia Chenevix-Trench; Min-Han Tan; Sok Kean Khoo; Bin Tean Teh; Siu Tsan Yuen; Suet Yi Leung; Richard Wooster; P Andrew Futreal; Michael R Stratton
Journal:  Nature       Date:  2007-03-08       Impact factor: 49.962

9.  Proofreading exonuclease activity of human DNA polymerase delta and its effects on lesion-bypass DNA synthesis.

Authors:  Ruzaliya Fazlieva; Cynthia S Spittle; Darlene Morrissey; Harutoshi Hayashi; Hong Yan; Yoshihiro Matsumoto
Journal:  Nucleic Acids Res       Date:  2009-03-12       Impact factor: 16.971

10.  The efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases delta and eta.

Authors:  Scott D McCulloch; Robert J Kokoska; Parie Garg; Peter M Burgers; Thomas A Kunkel
Journal:  Nucleic Acids Res       Date:  2009-03-12       Impact factor: 16.971

View more
  29 in total

1.  The use of modified and non-natural nucleotides provide unique insights into pro-mutagenic replication catalyzed by polymerase eta.

Authors:  Jung-Suk Choi; Anvesh Dasari; Peter Hu; Stephen J Benkovic; Anthony J Berdis
Journal:  Nucleic Acids Res       Date:  2015-12-29       Impact factor: 16.971

Review 2.  Exploiting replicative stress to treat cancer.

Authors:  Matthias Dobbelstein; Claus Storgaard Sørensen
Journal:  Nat Rev Drug Discov       Date:  2015-05-08       Impact factor: 84.694

3.  Kinetics, structure, and mechanism of 8-Oxo-7,8-dihydro-2'-deoxyguanosine bypass by human DNA polymerase η.

Authors:  Amritraj Patra; Leslie D Nagy; Qianqian Zhang; Yan Su; Livia Müller; F Peter Guengerich; Martin Egli
Journal:  J Biol Chem       Date:  2014-04-23       Impact factor: 5.157

4.  Targeted and Persistent 8-Oxoguanine Base Damage at Telomeres Promotes Telomere Loss and Crisis.

Authors:  Elise Fouquerel; Ryan P Barnes; Shikhar Uttam; Simon C Watkins; Marcel P Bruchez; Patricia L Opresko
Journal:  Mol Cell       Date:  2019-05-14       Impact factor: 17.970

5.  A fidelity mechanism in DNA polymerase lambda promotes error-free bypass of 8-oxo-dG.

Authors:  Matthew J Burak; Kip E Guja; Elena Hambardjieva; Burak Derkunt; Miguel Garcia-Diaz
Journal:  EMBO J       Date:  2016-08-01       Impact factor: 11.598

6.  Unlike catalyzing error-free bypass of 8-oxodGuo, DNA polymerase λ is responsible for a significant part of Fapy·dG-induced G → T mutations in human cells.

Authors:  Paritosh Pande; Kazuhiro Haraguchi; Yu-Lin Jiang; Marc M Greenberg; Ashis K Basu
Journal:  Biochemistry       Date:  2015-03-06       Impact factor: 3.162

7.  How DNA polymerase X preferentially accommodates incoming dATP opposite 8-oxoguanine on the template.

Authors:  Benedetta Sampoli Benítez; Zachary R Barbati; Karunesh Arora; Jasmina Bogdanovic; Tamar Schlick
Journal:  Biophys J       Date:  2013-12-03       Impact factor: 4.033

8.  Biochemical analysis of active site mutations of human polymerase η.

Authors:  Samuel C Suarez; Renee A Beardslee; Shannon M Toffton; Scott D McCulloch
Journal:  Mutat Res       Date:  2013-03-13       Impact factor: 2.433

9.  DNA polymerase δ-interacting protein 2 is a processivity factor for DNA polymerase λ during 8-oxo-7,8-dihydroguanine bypass.

Authors:  Giovanni Maga; Emmanuele Crespan; Enni Markkanen; Ralph Imhof; Antonia Furrer; Giuseppe Villani; Ulrich Hübscher; Barbara van Loon
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-04       Impact factor: 11.205

10.  Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.

Authors:  Matthew J Burak; Kip E Guja; Miguel Garcia-Diaz
Journal:  Nucleic Acids Res       Date:  2015-07-28       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.